RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 MGAT5Q09328 741 aa13.73□□□□□ -0.21
TRIM35-201ENST00000305364 TRIP10Q15642 601 aa13.73□□□□□ -0.21
TRIM35-201ENST00000305364 DNAJC24Q6P3W2 148 aa13.73□□□□□ -0.21
TRIM35-201ENST00000305364 TMEM270Q6UE05 265 aa13.73□□□□□ -0.21
TRIM35-201ENST00000305364 PRPF39Q86UA1 669 aaKnown RBP13.73□□□□□ -0.21
TRIM35-201ENST00000305364 GSDMBQ8TAX9 411 aa13.73□□□□□ -0.21
TRIM35-201ENST00000305364 ZNF333Q96JL9 665 aa13.73□□□□□ -0.21
TRIM35-201ENST00000305364 NDNQ99608 321 aa13.73□□□□□ -0.21
TRIM35-201ENST00000305364 WDR35Q9P2L0 1181 aa13.73□□□□□ -0.21
TRIM35-201ENST00000305364 R3HDM2Q9Y2K5 976 aaKnown RBP13.73□□□□□ -0.21
TRIM35-201ENST00000305364 C2CD2LO14523 706 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 PPP1R11O60927 126 aaPredicted RBP13.72□□□□□ -0.21
TRIM35-201ENST00000305364 NCF2P19878 526 aaPredicted RBP13.72□□□□□ -0.21
TRIM35-201ENST00000305364 BGNP21810 368 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 TUBP50607 506 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 MCL1Q07820 350 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 DMP1Q13316 513 aaPredicted RBP13.72□□□□□ -0.21
TRIM35-201ENST00000305364 PPP2R5CQ13362 524 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 DOK7Q18PE1 504 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 FAM192AQ9GZU8 254 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 WWP1Q9H0M0 922 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 TXNDC16Q9P2K2 825 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 ZNF212Q9UDV6 495 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 CHMP2BQ9UQN3 213 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 GSC2O15499 205 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 CASC4Q6P4E1 433 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 NUDCD3Q8IVD9 361 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 CADM1Q9BY67 442 aaKnown RBP13.72□□□□□ -0.21
TRIM35-201ENST00000305364 C12orf65Q9H3J6 166 aaKnown RBP13.72□□□□□ -0.21
TRIM35-201ENST00000305364 DAGLAQ9Y4D2 1042 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 PYGLP06737 847 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 RFX6Q8HWS3 928 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 CPXCR1Q8N123 301 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 PPP4R1Q8TF05 950 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 ALKBH8Q96BT7 664 aaKnown RBP13.72□□□□□ -0.21
TRIM35-201ENST00000305364 PAFAH2Q99487 392 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 SCINQ9Y6U3 715 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 COL1A1P02452 1464 aaPredicted RBP13.72□□□□□ -0.21
TRIM35-201ENST00000305364 OAS1P00973 400 aaKnown RBP13.72□□□□□ -0.21
TRIM35-201ENST00000305364 NFX1Q12986 1120 aaKnown RBP13.72□□□□□ -0.21
TRIM35-201ENST00000305364 PTK7Q13308 1070 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 SNRNP35Q16560 246 aaKnown RBP13.72□□□□□ -0.21
TRIM35-201ENST00000305364 ABCB5Q2M3G0 1257 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 ISLR2Q6UXK2 745 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 RFWD2Q8NHY2 731 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 CALN1Q9BXU9 219 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 SHCBP1LQ9BZQ2 653 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 DMAP1Q9NPF5 467 aaPredicted RBP13.72□□□□□ -0.21
TRIM35-201ENST00000305364 KMT5AQ9NQR1 393 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 USP20Q9Y2K6 914 aa13.72□□□□□ -0.21
TRIM35-201ENST00000305364 KRT37O76014 449 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 ASMTLO95671 621 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 ETS1P14921 441 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 TFDP1Q14186 410 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 C11orf91Q3C1V1 193 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 DNAL1Q4LDG9 190 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 ACSBG2Q5FVE4 666 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 CBWD2Q8IUF1 395 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 WDR75Q8IWA0 830 aaKnown RBP13.71□□□□□ -0.21
TRIM35-201ENST00000305364 ICA1LQ8NDH6 482 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 EPAS1Q99814 870 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 PRKAG3Q9UGI9 489 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 ROBO3Q96MS0 1386 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 H7C0C1 242 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 CETPP11597 493 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 ATP5OP48047 213 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 ALCAMQ13740 583 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 ZNF394Q53GI3 561 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 MAP3K21Q5TCX8 1036 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 DCAF4Q8WV16 495 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 TNS2Q63HR2 1409 aa13.71□□□□□ -0.21
TRIM35-201ENST00000305364 ECM29Q5VYK3 1845 aa13.71□□□□□ -0.22
TRIM35-201ENST00000305364 P4HA2O15460 535 aa13.71□□□□□ -0.22
TRIM35-201ENST00000305364 KCNQ2O43526 872 aa13.71□□□□□ -0.22
TRIM35-201ENST00000305364 HOXD13P35453 343 aa13.71□□□□□ -0.22
TRIM35-201ENST00000305364 HADHQ16836 314 aaKnown RBP13.71□□□□□ -0.22
TRIM35-201ENST00000305364 ZCCHC9Q8N567 271 aaKnown RBP13.71□□□□□ -0.22
TRIM35-201ENST00000305364 SPIRE2Q8WWL2 714 aa13.71□□□□□ -0.22
TRIM35-201ENST00000305364 UTP4Q969X6 686 aaKnown RBP13.71□□□□□ -0.22
TRIM35-201ENST00000305364 TMEM121Q9BTD3 319 aa13.71□□□□□ -0.22
TRIM35-201ENST00000305364 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.71□□□□□ -0.22
TRIM35-201ENST00000305364 TBX10O75333 385 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 BANF1O75531 89 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 STAM2O75886 525 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 RNF8O76064 485 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 ALDH1B1P30837 517 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 LIG4P49917 911 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 BMT2Q1RMZ1 405 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 PCGF5Q86SE9 256 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 ETNPPLQ8TBG4 499 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 SNRNP27Q8WVK2 155 aaKnown RBP13.7□□□□□ -0.22
TRIM35-201ENST00000305364 FAM213AQ9BRX8 229 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 DNPEPQ9ULA0 475 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 RPL26L1Q9UNX3 145 aaKnown RBP13.7□□□□□ -0.22
TRIM35-201ENST00000305364 C2orf71A6NGG8 1288 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 ATP6V1B1P15313 513 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 AP1B1Q10567 949 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 SLC24A2Q9UI40 661 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 WASF2Q9Y6W5 498 aa13.7□□□□□ -0.22
TRIM35-201ENST00000305364 BCL9O00512 1426 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms