RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 NCOA4Q13772 614 aa7.66□□□□□ -1.18
RGPD3-201ENST00000304514 ODF2Q5BJF6 829 aa7.66□□□□□ -1.18
RGPD3-201ENST00000304514 LIN9Q5TKA1 542 aa7.66□□□□□ -1.18
RGPD3-201ENST00000304514 CCDC13Q8IYE1 715 aa7.66□□□□□ -1.18
RGPD3-201ENST00000304514 PWWP2AQ96N64 755 aa7.66□□□□□ -1.18
RGPD3-201ENST00000304514 C11orf70Q9BRQ4 267 aa7.66□□□□□ -1.18
RGPD3-201ENST00000304514 CYTH4Q9UIA0 394 aa7.66□□□□□ -1.18
RGPD3-201ENST00000304514 DNM1LO00429 736 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 DNAJC8O75937 253 aaPredicted RBP7.65□□□□□ -1.18
RGPD3-201ENST00000304514 ABHD2P08910 425 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 MMP8P22894 467 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 LAMTOR4Q0VGL1 99 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 FBXW10Q5XX13 1052 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 PRUNE1Q86TP1 453 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 ZCCHC9Q8N567 271 aaKnown RBP7.65□□□□□ -1.18
RGPD3-201ENST00000304514 TARS2Q9BW92 718 aaKnown RBP7.65□□□□□ -1.18
RGPD3-201ENST00000304514 BCO2Q9BYV7 579 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 GGA3Q9NZ52 723 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 RGS16O15492 202 aaPredicted RBP7.65□□□□□ -1.18
RGPD3-201ENST00000304514 TTC4O95801 387 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 CD58P19256 250 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 BAG6P46379 1132 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 PPARDQ03181 441 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 TAZQ16635 292 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 LY6KQ17RY6 165 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 CGB2Q6NT52 195 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 RCOR2Q8IZ40 523 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 XYLT2Q9H1B5 865 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 EFCC1Q9HA90 598 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 MRPL47Q9HD33 250 aaKnown RBP7.65□□□□□ -1.18
RGPD3-201ENST00000304514 HOMER3Q9NSC5 361 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.65□□□□□ -1.18
RGPD3-201ENST00000304514 RASGRF2O14827 1237 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 ZBTB7AO95365 584 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 ATF2P15336 505 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 MBTD1Q05BQ5 628 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 LRRC38Q5VT99 294 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 FAM160B1Q5W0V3 765 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 TMEM130Q8N3G9 435 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 ARFGAP1Q8N6T3 406 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 IPO4Q8TEX9 1081 aaKnown RBP7.65□□□□□ -1.18
RGPD3-201ENST00000304514 PRPF31Q8WWY3 499 aaKnown RBP7.65□□□□□ -1.18
RGPD3-201ENST00000304514 MTMR12Q9C0I1 747 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 STMN4Q9H169 189 aaPredicted RBP7.65□□□□□ -1.18
RGPD3-201ENST00000304514 CD2APQ9Y5K6 639 aa7.65□□□□□ -1.18
RGPD3-201ENST00000304514 MCM3APO60318 1980 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 LRRIQ4A6NIV6 560 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 RPL7AP62424 266 aaKnown RBP7.65□□□□□ -1.19
RGPD3-201ENST00000304514 IFT88Q13099 833 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 TRIP13Q15645 432 aaPredicted RBP7.65□□□□□ -1.19
RGPD3-201ENST00000304514 LRRC34Q8IZ02 419 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 CYP4X1Q8N118 509 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 CNKSR2Q8WXI2 1034 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 FAM118BQ9BPY3 351 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.65□□□□□ -1.19
RGPD3-201ENST00000304514 ADAM22Q9P0K1 906 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 FOXO6A8MYZ6 492 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 K7ERI5 159 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 HNRNPH1P31943 449 aaKnown RBP7.65□□□□□ -1.19
RGPD3-201ENST00000304514 CELF3Q5SZQ8 465 aaKnown RBP7.65□□□□□ -1.19
RGPD3-201ENST00000304514 TMEM63BQ5T3F8 832 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 METTL7BQ6UX53 244 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 SPOCD1Q6ZMY3 1216 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 PLPPR4Q7Z2D5 763 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 GPC2Q8N158 579 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 ZNF606Q8WXB4 792 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 BBXQ8WY36 941 aaPredicted RBP7.65□□□□□ -1.19
RGPD3-201ENST00000304514 TFAP2BQ92481 460 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 PRKAG3Q9UGI9 489 aa7.65□□□□□ -1.19
RGPD3-201ENST00000304514 DNAJC25-GNG10A0A024R161 153 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 hCG_1818297A0A087WSY0 165 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 TLR3O15455 904 aaKnown RBP7.64□□□□□ -1.19
RGPD3-201ENST00000304514 IQCF3P0C7M6 154 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 BRD2P25440 801 aaKnown RBP7.64□□□□□ -1.19
RGPD3-201ENST00000304514 GABRB2P47870 512 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 COPS2P61201 443 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 NFX1Q12986 1120 aaKnown RBP7.64□□□□□ -1.19
RGPD3-201ENST00000304514 GLIS1Q8NBF1 620 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 SELENOSQ9BQE4 189 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 PLVAPQ9BX97 442 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 HEMGNQ9BXL5 484 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 MRPL4Q9BYD3 311 aaKnown RBP7.64□□□□□ -1.19
RGPD3-201ENST00000304514 NFKBIZQ9BYH8 718 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 ACTR5Q9H9F9 607 aaPredicted RBP7.64□□□□□ -1.19
RGPD3-201ENST00000304514 KLHL11Q9NVR0 708 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 CAPN7Q9Y6W3 813 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 SLCO1A2P46721 670 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 SCTRP47872 440 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 OASLQ15646 514 aaKnown RBP7.64□□□□□ -1.19
RGPD3-201ENST00000304514 TXNRD3NBQ6F5E7 133 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 LINC01465Q8N7H1 131 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.64□□□□□ -1.19
RGPD3-201ENST00000304514 SLC7A3Q8WY07 619 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 ZNF518BQ9C0D4 1074 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 ANAPC5Q9UJX4 755 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 CALB1P05937 261 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 CDKN2BP42772 138 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 EFNA5P52803 228 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 MYL6P60660 151 aa7.64□□□□□ -1.19
RGPD3-201ENST00000304514 ATP13A4Q4VNC1 1196 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms