RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 MDH1BQ5I0G3 518 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 FOXP4Q8IVH2 680 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 OTULINQ96BN8 352 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 DCLK3Q9C098 648 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 AS3MTQ9HBK9 375 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 BARHL2Q9NY43 387 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 FBXO40Q9UH90 709 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 PCYOX1Q9UHG3 505 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 ADAM28Q9UKQ2 775 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 DISP2A7MBM2 1401 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 TTC26A0AVF1 554 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 SOWAHDA6NJG2 315 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 B4E1Z4 1266 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 TIMM44O43615 452 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 RHOBTB1O94844 696 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 ITGA6P23229 1130 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 PGM1P36871 562 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 MARSP56192 900 aaKnown RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 PABPC4Q13310 644 aaKnown RBP eCLIP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 PKN2Q16513 984 aaKnown RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 ADCK1Q86TW2 530 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 THNSL1Q8IYQ7 743 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 PHC3Q8NDX5 983 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 SPATA20Q8TB22 786 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 HELQQ8TDG4 1101 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 ZNF496Q96IT1 587 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 ADPGKQ9BRR6 497 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 KBTBD4Q9NVX7 518 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 BFARQ9NZS9 450 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 ADAM30Q9UKF2 790 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 POLIQ9UNA4 740 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 A6NJR5 290 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 SNAP91O60641 907 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 MAGEC1O60732 1142 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 DAB1O75553 588 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 GUCY2FP51841 1108 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 COPAP53621 1224 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 PTP4A2Q12974 167 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 TP53BP2Q13625 1128 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 MTFR1Q15390 333 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 FAM133BQ5BKY9 247 aaKnown RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 OTUD7BQ6GQQ9 843 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 LRRC31Q6UY01 552 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 RGS9BPQ6ZS82 235 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 TBC1D1Q86TI0 1168 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 LINC00523Q86TU6 105 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 USP33Q8TEY7 942 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 TRMOQ9BU70 441 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 PSTPIP2Q9H939 334 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 NRBP2Q9NSY0 501 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 ZC3H7BQ9UGR2 993 aaKnown RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 ZNF229Q9UJW7 825 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 LRFN2Q9ULH4 789 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 AP1M2Q9Y6Q5 423 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 KLHL33A6NCF5 533 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 ZBED1O96006 694 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 SNRPAP09012 282 aaKnown RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 CIITAP33076 1130 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 PEX5P50542 639 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 KNOP1Q1ED39 458 aaKnown RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 B3GNT6Q6ZMB0 384 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 DNAJB8Q8NHS0 232 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 SCAF8Q9UPN6 1271 aaKnown RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 FARP1Q9Y4F1 1045 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 UNC5CO95185 931 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 CTCFP49711 727 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 GK3PQ14409 553 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 TKFCQ3LXA3 575 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 FBXW10Q5XX13 1052 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 CENPPQ6IPU0 288 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 SYCE2Q6PIF2 218 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 BARGINQ6ZT62 677 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 ARMCX2Q7L311 632 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 METTL16Q86W50 562 aaKnown RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 NT5DC4Q86YG4 428 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 KIAA2013Q8IYS2 634 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 GDAP1Q8TB36 358 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 ABTB1Q969K4 478 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 MRPL48Q96GC5 212 aaKnown RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 KLHL4Q9C0H6 718 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 TAGLN3Q9UI15 199 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 STON1Q9Y6Q2 735 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 KIF1AQ12756 1690 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 BTBD19C9JJ37 291 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 STX7O15400 261 aaKnown RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 IL1BP01584 269 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 GARTP22102 1010 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 POLE2P56282 527 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 SNIP1Q8TAD8 396 aaKnown RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 STRBPQ96SI9 672 aaKnown RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 PHF20Q9BVI0 1012 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 CACNA2D2Q9NY47 1150 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 NCANO14594 1321 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 F8W031 263 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 VIL1P09327 827 aaKnown RBP5.48□□□□□ -1.53
SCN1A-201ENST00000303395 HAND2P61296 217 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 ERMARDQ5T6L9 678 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 IRAK1BP1Q5VVH5 260 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 RINLQ6ZS11 566 aa5.48□□□□□ -1.53
SCN1A-201ENST00000303395 MARK2Q7KZI7 788 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms