RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 SCAND2PQ9GZW5 306 aaPredicted RBP12.18□□□□□ -0.46
CLCC1-201ENST00000302500 PCIF1Q9H4Z3 704 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 KCNK12Q9HB15 430 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 DPP3Q9NY33 737 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 FAM13BQ9NYF5 915 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 RBAKQ9NYW8 714 aaPredicted RBP12.18□□□□□ -0.46
CLCC1-201ENST00000302500 CEP72Q9P209 647 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 AFF4Q9UHB7 1163 aaKnown RBP12.18□□□□□ -0.46
CLCC1-201ENST00000302500 DPP7Q9UHL4 492 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 USP25Q9UHP3 1055 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 MAFFQ9ULX9 164 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 SORCS3Q9UPU3 1222 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 ARIH1Q9Y4X5 557 aaPredicted RBP12.18□□□□□ -0.46
CLCC1-201ENST00000302500 PIEZO1Q92508 2521 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 NCANO14594 1321 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 SHISA7A6NL88 538 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 GABRDO14764 452 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 RHOBTB3O94955 611 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 MYL1P05976 194 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 OR4Q2P0C623 313 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 LAMP2P13473 410 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 COL9A1P20849 921 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 FCARP24071 287 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 MATR3P43243 847 aaKnown RBP eCLIP12.17□□□□□ -0.46
CLCC1-201ENST00000302500 YWHAHQ04917 246 aaPredicted RBP12.17□□□□□ -0.46
CLCC1-201ENST00000302500 GPR17Q13304 367 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 MYBPC2Q14324 1141 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 CTXN3Q4LDR2 81 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 C1orf220Q5T0J3 134 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 ZNF280DQ6N043 979 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 KRBA2Q6ZNG9 492 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 OTOP3Q7RTS5 596 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 SLC9A9Q8IVB4 645 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 PLCD3Q8N3E9 789 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 APPL2Q8NEU8 664 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 MFSD14AQ96MC6 490 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 PYM1Q9BRP8 204 aaKnown RBP12.17□□□□□ -0.46
CLCC1-201ENST00000302500 MKNK1Q9BUB5 465 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 MTMR12Q9C0I1 747 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 SLC39A2Q9NP94 309 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 INTS13Q9NVM9 706 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 GDAP2Q9NXN4 497 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 LIMD1Q9UGP4 676 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 NUB1Q9Y5A7 615 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 INSL5Q9Y5Q6 135 aa12.17□□□□□ -0.46
CLCC1-201ENST00000302500 ZNF638Q14966 1978 aaKnown RBP12.16□□□□□ -0.46
CLCC1-201ENST00000302500 MTMR11A4FU01 709 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 H7C4K7 107 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 CCL16O15467 120 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 XPOTO43592 962 aaKnown RBP12.16□□□□□ -0.46
CLCC1-201ENST00000302500 PDGFBP01127 241 aaPredicted RBP12.16□□□□□ -0.46
CLCC1-201ENST00000302500 ITGB3P05106 788 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 NPR3P17342 541 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 PSMD6Q15008 389 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 KNOP1Q1ED39 458 aaKnown RBP12.16□□□□□ -0.46
CLCC1-201ENST00000302500 CENPPQ6IPU0 288 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 ARMCX5Q6P1M9 558 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 NPAS3Q8IXF0 933 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 LRRC52Q8N7C0 313 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 RSAD2Q8WXG1 361 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 FGF13Q92913 245 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 FGF14Q92915 247 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 RPP25Q9BUL9 199 aaKnown RBP12.16□□□□□ -0.46
CLCC1-201ENST00000302500 OXCT2Q9BYC2 517 aaPredicted RBP12.16□□□□□ -0.46
CLCC1-201ENST00000302500 ZCWPW1Q9H0M4 648 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 XYLT2Q9H1B5 865 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 HSFX1Q9UBD0 423 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 L1RE1Q9UN81 338 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 DUSP12Q9UNI6 340 aa12.16□□□□□ -0.46
CLCC1-201ENST00000302500 PATJQ8NI35 1801 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 TMEM221A6NGB7 291 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 OR6C75A6NL08 312 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 KPNA7A9QM74 516 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 M0R296 226 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 NARSO43776 548 aaKnown RBP12.15□□□□□ -0.46
CLCC1-201ENST00000302500 MICAL2O94851 1124 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 ZNF202O95125 648 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 ATF6P18850 670 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 POLR2BP30876 1174 aaKnown RBP12.15□□□□□ -0.46
CLCC1-201ENST00000302500 SYKP43405 635 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 TAF6P49848 677 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 CYP24A1Q07973 514 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 ADCY1Q08828 1119 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 SNRNP35Q16560 246 aaKnown RBP12.15□□□□□ -0.46
CLCC1-201ENST00000302500 NFIL3Q16649 462 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 CCDC142Q17RM4 750 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 PPM1LQ5SGD2 360 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 WSCD1Q658N2 575 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 LMBRD2Q68DH5 695 aaPredicted RBP12.15□□□□□ -0.46
CLCC1-201ENST00000302500 OVOS1Q6IE37 1185 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 OSTM1Q86WC4 334 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 WDR49Q8IV35 697 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 UBALD2Q8IYN6 164 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 PDCL2Q8N4E4 241 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 TMEM87AQ8NBN3 555 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 KBTBD7Q8WVZ9 684 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 FAM212AQ96EL1 285 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 TSHZ2Q9NRE2 1034 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 TMLHEQ9NVH6 421 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms