RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ALDH7A1P49419 539 aaKnown RBP10.17□□□□□ -0.78
RFX3-201ENST00000302303 FXR1P51114 621 aaKnown RBP eCLIP10.17□□□□□ -0.78
RFX3-201ENST00000302303 JAM2P57087 298 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 PLCB3Q01970 1234 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 GCNT1Q02742 428 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 CUL2Q13617 745 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 KIAA0319Q5VV43 1072 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 WSCD1Q658N2 575 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 E4F1Q66K89 784 aaPredicted RBP10.17□□□□□ -0.78
RFX3-201ENST00000302303 PDCL2Q8N4E4 241 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 KLHL23Q8NBE8 558 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 B3GALT6Q96L58 329 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 ZNF558Q96NG5 402 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 NT5C1BQ96P26 610 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 COLEC11Q9BWP8 271 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 NIF3L1Q9GZT8 377 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 UBE2TQ9NPD8 197 aaPredicted RBP10.17□□□□□ -0.78
RFX3-201ENST00000302303 NXF1Q9UBU9 619 aaKnown RBP10.17□□□□□ -0.78
RFX3-201ENST00000302303 DNAJC12Q9UKB3 198 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 TIMM13Q9Y5L4 95 aaPredicted RBP10.17□□□□□ -0.78
RFX3-201ENST00000302303 SNX9Q9Y5X1 595 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 VWA8A3KMH1 1905 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 FOXN3O00409 490 aaPredicted RBP10.17□□□□□ -0.78
RFX3-201ENST00000302303 CYB561D2O14569 222 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 LILRB3O75022 631 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 TACC1O75410 805 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 TADA2AO75478 443 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 PNMA6AP0CW24 399 aaPredicted RBP10.17□□□□□ -0.78
RFX3-201ENST00000302303 LMO2P25791 158 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 TKTP29401 623 aaKnown RBP10.17□□□□□ -0.78
RFX3-201ENST00000302303 CDC25BP30305 580 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 POLR2FP61218 127 aaKnown RBP10.17□□□□□ -0.78
RFX3-201ENST00000302303 ERVK-21P61565 698 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 SMAD3P84022 425 aaKnown RBP10.17□□□□□ -0.78
RFX3-201ENST00000302303 CETN1Q12798 172 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 MYO1EQ12965 1108 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 ARID5BQ14865 1188 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 LRIT3Q3SXY7 679 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 SV2CQ496J9 727 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 ZNF667Q5HYK9 610 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 RTP2Q5QGT7 225 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 SPECC1LQ69YQ0 1117 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 FUT10Q6P4F1 479 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 RSPO2Q6UXX9 243 aaPredicted RBP10.17□□□□□ -0.78
RFX3-201ENST00000302303 DPH6Q7L8W6 267 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 PPM1KQ8N3J5 372 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 OLIG1Q8TAK6 271 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 SHC3Q92529 594 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 ZNF560Q96MR9 790 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 TWNKQ96RR1 684 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 NKX2-4Q9H2Z4 354 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 SPG21Q9NZD8 308 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 HMGXB4Q9UGU5 601 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 CAPN11Q9UMQ6 739 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 REV3LO60673 3130 aa10.17□□□□□ -0.78
RFX3-201ENST00000302303 EPOPA6NHQ4 379 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 FGF18O76093 207 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 OAZ2O95190 189 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 CALCAP01258 141 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 FAM163BP0C2L3 166 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 PAX3P23760 479 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 ZNF132P52740 706 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 GOLGA8FQ08AF8 430 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 GOLGA8DPQ0D2H9 430 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 INCA1Q0VD86 236 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 DRAP1Q14919 205 aaPredicted RBP10.16□□□□□ -0.78
RFX3-201ENST00000302303 CCDC142Q17RM4 750 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 WDR44Q5JSH3 913 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 SCARA5Q6ZMJ2 495 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 DDX53Q86TM3 631 aaKnown RBP10.16□□□□□ -0.78
RFX3-201ENST00000302303 FAM71AQ8IYT1 594 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 TOP6BLQ8N6T0 577 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 SPPL3Q8TCT6 385 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 JAKMIP2Q96AA8 810 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 PDLIM2Q96JY6 352 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 PKMYT1Q99640 499 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 LPIN3Q9BQK8 851 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 ZSWIM1Q9BR11 485 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 STK33Q9BYT3 514 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 CYP3A43Q9HB55 503 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 ACP6Q9NPH0 428 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 NLRC4Q9NPP4 1024 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 CISHQ9NSE2 258 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 CEP72Q9P209 647 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 PCDHB8Q9UN66 801 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 TSC2P49815 1807 aa10.16□□□□□ -0.78
RFX3-201ENST00000302303 PLXNA4Q9HCM2 1894 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 SZT2Q5T011 3432 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 A0A1W2PPC1 479 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 A0A1W2PQJ5 194 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 F8VZ95 297 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 GRM6O15303 877 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 CILPO75339 1184 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 TYMPP19971 482 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 WARSP23381 471 aaKnown RBP10.15□□□□□ -0.78
RFX3-201ENST00000302303 DNAJB2P25686 324 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 CASP14P31944 242 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 CLCN1P35523 988 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 RAD23BP54727 409 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 ERVFC1P60507 584 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms