RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ADAM22Q9P0K1 906 aa23.74■■□□□ 1.39
SMAD1-201ENST00000302085 STAU1O95793 577 aaKnown RBP23.74■■□□□ 1.39
SMAD1-201ENST00000302085 PRKAR2AP13861 404 aaKnown RBP23.74■■□□□ 1.39
SMAD1-201ENST00000302085 YARSP54577 528 aaKnown RBP23.74■■□□□ 1.39
SMAD1-201ENST00000302085 RAD23BP54727 409 aa23.74■■□□□ 1.39
SMAD1-201ENST00000302085 MMS22LQ6ZRQ5 1243 aa23.74■■□□□ 1.39
SMAD1-201ENST00000302085 KLHDC9Q8NEP7 349 aa23.74■■□□□ 1.39
SMAD1-201ENST00000302085 CD101Q93033 1021 aa23.74■■□□□ 1.39
SMAD1-201ENST00000302085 CYP3A43Q9HB55 503 aa23.74■■□□□ 1.39
SMAD1-201ENST00000302085 ARFGAP3Q9NP61 516 aa23.74■■□□□ 1.39
SMAD1-201ENST00000302085 TRIP11Q15643 1979 aa23.73■■□□□ 1.39
SMAD1-201ENST00000302085 AKAP5P24588 427 aa23.73■■□□□ 1.39
SMAD1-201ENST00000302085 MRPS6P82932 125 aaKnown RBP23.73■■□□□ 1.39
SMAD1-201ENST00000302085 WDTC1Q8N5D0 677 aa23.73■■□□□ 1.39
SMAD1-201ENST00000302085 KRT35Q92764 455 aa23.73■■□□□ 1.39
SMAD1-201ENST00000302085 WNT8BQ93098 351 aa23.73■■□□□ 1.39
SMAD1-201ENST00000302085 TRIM7Q9C029 511 aa23.73■■□□□ 1.39
SMAD1-201ENST00000302085 TRIM6Q9C030 488 aaPredicted RBP23.73■■□□□ 1.39
SMAD1-201ENST00000302085 PCDHGC3Q9UN70 934 aa23.73■■□□□ 1.39
SMAD1-201ENST00000302085 NOC2LQ9Y3T9 749 aaKnown RBP23.73■■□□□ 1.39
SMAD1-201ENST00000302085 MIF4GDA9UHW6 222 aaKnown RBP23.72■■□□□ 1.39
SMAD1-201ENST00000302085 PGRMC1O00264 195 aaKnown RBP23.72■■□□□ 1.39
SMAD1-201ENST00000302085 TRPA1O75762 1119 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 ZMYND10O75800 440 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 RECQL4O94761 1208 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 LSM8O95777 96 aaKnown RBP23.72■■□□□ 1.39
SMAD1-201ENST00000302085 PEX5P50542 639 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 C1QBPQ07021 282 aaKnown RBP23.72■■□□□ 1.39
SMAD1-201ENST00000302085 KCNA10Q16322 511 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 LIN9Q5TKA1 542 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 CCSAPQ6IQ19 270 aaPredicted RBP23.72■■□□□ 1.39
SMAD1-201ENST00000302085 TWNKQ96RR1 684 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 APOL6Q9BWW8 343 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 ELOVL4Q9GZR5 314 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 RNF39Q9H2S5 420 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 CREBZFQ9NS37 354 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 RNF19AQ9NV58 838 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 CNTN3Q9P232 1028 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 SRRDQ9UH36 339 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 DMGDHQ9UI17 866 aaKnown RBP23.72■■□□□ 1.39
SMAD1-201ENST00000302085 TTC7AQ9ULT0 858 aaPredicted RBP23.72■■□□□ 1.39
SMAD1-201ENST00000302085 RRP9O43818 475 aaKnown RBP23.72■■□□□ 1.39
SMAD1-201ENST00000302085 CILPO75339 1184 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 ASGR1P07306 291 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 MARCKSL1P49006 195 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 CCDC70Q6NSX1 233 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 PPP1R2P3Q6NXS1 205 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 FAM228AQ86W67 206 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 C18orf25Q96B23 403 aaPredicted RBP23.72■■□□□ 1.39
SMAD1-201ENST00000302085 CFHR5Q9BXR6 569 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 WNT8AQ9H1J5 351 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 CARD9Q9H257 536 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 HMGXB4Q9UGU5 601 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 CDY2AQ9Y6F7 541 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 CASP8AP2Q9UKL3 1982 aa23.72■■□□□ 1.39
SMAD1-201ENST00000302085 PAEPP09466 180 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 P4HA1P13674 534 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 MMP8P22894 467 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 ORC1Q13415 861 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 LONRF2Q1L5Z9 754 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 FAM47CQ5HY64 1035 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 BEND6Q5SZJ8 279 aaPredicted RBP23.71■■□□□ 1.39
SMAD1-201ENST00000302085 SLC4A11Q8NBS3 891 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 CD99L2Q8TCZ2 262 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 HINFPQ9BQA5 517 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 TUBGCP4Q9UGJ1 667 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 ANAPC7Q9UJX3 599 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 PPEF2O14830 753 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 MYCNP04198 464 aaPredicted RBP23.71■■□□□ 1.39
SMAD1-201ENST00000302085 CDH5P33151 784 aaPredicted RBP23.71■■□□□ 1.39
SMAD1-201ENST00000302085 SLC7A5Q01650 507 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 ZNF211Q13398 564 aaPredicted RBP23.71■■□□□ 1.39
SMAD1-201ENST00000302085 MAMLD1Q13495 774 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 PLEKHA7Q6IQ23 1121 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 DENND1BQ6P3S1 775 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 SERINC5Q86VE9 423 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 UBL4BQ8N7F7 174 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 TMEM35BQ8NCS4 154 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 C1orf131Q8NDD1 294 aaKnown RBP23.71■■□□□ 1.39
SMAD1-201ENST00000302085 UBE2Q2Q8WVN8 375 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 KRT12Q99456 494 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 AP1M1Q9BXS5 423 aa23.71■■□□□ 1.39
SMAD1-201ENST00000302085 GRIN2DO15399 1336 aa23.7■■□□□ 1.38
SMAD1-201ENST00000302085 CD19P15391 556 aa23.7■■□□□ 1.38
SMAD1-201ENST00000302085 GLE1Q53GS7 698 aaKnown RBP23.7■■□□□ 1.38
SMAD1-201ENST00000302085 GLRA4Q5JXX5 417 aa23.7■■□□□ 1.38
SMAD1-201ENST00000302085 SMG8Q8ND04 991 aaKnown RBP23.7■■□□□ 1.38
SMAD1-201ENST00000302085 ZNF518BQ9C0D4 1074 aa23.7■■□□□ 1.38
SMAD1-201ENST00000302085 KLK14Q9P0G3 267 aa23.7■■□□□ 1.38
SMAD1-201ENST00000302085 TRPV2Q9Y5S1 764 aa23.7■■□□□ 1.38
SMAD1-201ENST00000302085 RALGAPA2Q2PPJ7 1873 aa23.7■■□□□ 1.38
SMAD1-201ENST00000302085 ERLIN1O75477 346 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 CTNNA2P26232 953 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 XKR4Q5GH76 650 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 CCNI2Q6ZMN8 369 aaPredicted RBP23.69■■□□□ 1.38
SMAD1-201ENST00000302085 BEST2Q8NFU1 509 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 TMEM176AQ96HP8 235 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 RNPC3Q96LT9 517 aaKnown RBP23.69■■□□□ 1.38
SMAD1-201ENST00000302085 PARP2Q9UGN5 583 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 PCDHA3Q9Y5H8 950 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms