RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 KCNK13Q9HB14 408 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 GRIN3BO60391 1043 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 SREBF1P36956 1147 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 CPA2P48052 419 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 TRAPPC3LQ5T215 181 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 KRT27Q7Z3Y8 459 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 LRRC6Q86X45 466 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 DDX1Q92499 740 aaKnown RBP11.49□□□□□ -0.57
ZNF558-201ENST00000301475 OPTNQ96CV9 577 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 TTC25Q96NG3 672 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 NR1H4Q96RI1 486 aaPredicted RBP11.49□□□□□ -0.57
ZNF558-201ENST00000301475 CBWD1Q9BRT8 395 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 GLT8D2Q9H1C3 349 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 NARFQ9UHQ1 456 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.49□□□□□ -0.57
ZNF558-201ENST00000301475 RARBP10826 455 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 MXI1P50539 228 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 CCNG2Q16589 344 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 LIN52Q52LA3 116 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 BBOF1Q8ND07 529 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 DHX38Q92620 1227 aaKnown RBP11.49□□□□□ -0.57
ZNF558-201ENST00000301475 SEMA4DQ92854 862 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 DTNBP1Q96EV8 351 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 STRA6Q9BX79 667 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 TMEM120AQ9BXJ8 343 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 TMEM117Q9H0C3 514 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 MMADHCQ9H3L0 296 aaPredicted RBP11.49□□□□□ -0.57
ZNF558-201ENST00000301475 ZWILCHQ9H900 591 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 DDX4Q9NQI0 724 aaKnown RBP11.49□□□□□ -0.57
ZNF558-201ENST00000301475 ARMCX1Q9P291 453 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 SLC17A7Q9P2U7 560 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 GREB1LQ9C091 1923 aaPredicted RBP11.49□□□□□ -0.57
ZNF558-201ENST00000301475 GAKO14976 1311 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 PDLIM1O00151 329 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 RNASEH1O60930 286 aaKnown RBP11.49□□□□□ -0.57
ZNF558-201ENST00000301475 ETS1P14921 441 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 HOXA13P31271 388 aaPredicted RBP11.49□□□□□ -0.57
ZNF558-201ENST00000301475 SHMT1P34896 483 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 ZRSR2Q15696 482 aaKnown RBP11.49□□□□□ -0.57
ZNF558-201ENST00000301475 CCDC142Q17RM4 750 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 SHROOM1Q2M3G4 852 aaPredicted RBP11.49□□□□□ -0.57
ZNF558-201ENST00000301475 DAW1Q8N136 415 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 HAPLN3Q96S86 360 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 KLF6Q99612 283 aaPredicted RBP11.49□□□□□ -0.57
ZNF558-201ENST00000301475 PSMC3IPQ9P2W1 217 aaPredicted RBP11.49□□□□□ -0.57
ZNF558-201ENST00000301475 SEL1LQ9UBV2 794 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 PHF24Q9UPV7 400 aa11.49□□□□□ -0.57
ZNF558-201ENST00000301475 CNTNAP4Q9C0A0 1308 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 GOLGA8RI6L899 631 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 DNALI1O14645 258 aaPredicted RBP11.48□□□□□ -0.57
ZNF558-201ENST00000301475 CREB3O43889 395 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 USP1O94782 785 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 CDK16Q00536 496 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 CETN1Q12798 172 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 USH1GQ495M9 461 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 ACAD10Q6JQN1 1059 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 GSTA5Q7RTV2 222 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 ZBED8Q8IZ13 594 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 TCP10LQ8TDR4 215 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 FAM161BQ96MY7 647 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 STK32BQ9NY57 414 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 TBC1D30Q9Y2I9 924 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 DNAJC6O75061 913 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 ESRRAP11474 423 aaPredicted RBP11.48□□□□□ -0.57
ZNF558-201ENST00000301475 GJC1P36383 396 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 CDK7P50613 346 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 ARFIP2P53365 341 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 TAS2R40P59535 323 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 CDC16Q13042 620 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 MFSD14BQ5SR56 506 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 TRIM74Q86UV6 250 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 TRIM73Q86UV7 250 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 VTI1AQ96AJ9 217 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 WDR18Q9BV38 432 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 TRIM55Q9BYV6 548 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 OSBPL8Q9BZF1 889 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 NMUR2Q9GZQ4 415 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 CD209Q9NNX6 404 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 DAGLAQ9Y4D2 1042 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 RPS6KL1Q9Y6S9 549 aa11.48□□□□□ -0.57
ZNF558-201ENST00000301475 IGLV3-22A0A075B6J6 115 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 P4HA2O15460 535 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 ANPEPP15144 967 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 CD58P19256 250 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 CIITAP33076 1130 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 PGM1P36871 562 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 SLC1A1P43005 524 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 NOP14P78316 857 aaKnown RBP11.47□□□□□ -0.57
ZNF558-201ENST00000301475 DSG1Q02413 1049 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 ZBTB16Q05516 673 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 MYBPC3Q14896 1274 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 STXBP4Q6ZWJ1 553 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 LARGE2Q8N3Y3 721 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.47□□□□□ -0.57
ZNF558-201ENST00000301475 CLPTM1LQ96KA5 538 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 ECSITQ9BQ95 431 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 MANSC1Q9H8J5 431 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 PREBQ9HCU5 417 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 KLHL11Q9NVR0 708 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 CLUHO75153 1309 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms