RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 MCF2P10911 925 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 CDC42EP1Q00587 391 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 NBPF20Q3BBV1 942 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 KDM4CQ9H3R0 1056 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 CXorf56Q9H5V9 222 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 ATF5Q9Y2D1 282 aaPredicted RBP20.26■□□□□ 0.83
TSR1-201ENST00000301364 NFIAQ12857 509 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 FGD4Q96M96 766 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 O00370 1275 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 NVLO15381 856 aaKnown RBP20.26■□□□□ 0.83
TSR1-201ENST00000301364 DNAJC3Q13217 504 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 TTC39BQ5VTQ0 682 aaPredicted RBP20.26■□□□□ 0.83
TSR1-201ENST00000301364 EPAS1Q99814 870 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 SLC24A3Q9HC58 644 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 SCTRP47872 440 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 GPR162Q16538 588 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 STYK1Q6J9G0 422 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 ZNF662Q6ZS27 426 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 MAGEB18Q96M61 343 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 TAAR1Q96RJ0 339 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 SNX9Q9Y5X1 595 aa20.26■□□□□ 0.83
TSR1-201ENST00000301364 MAGEB2O15479 319 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 LCP1P13796 627 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 ARPP19P56211 112 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 KRT35Q92764 455 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 NT5C1AQ9BXI3 368 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 GDF3Q9NR23 364 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 LRFN2Q9ULH4 789 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 FASTKD1Q53R41 847 aaKnown RBP20.25■□□□□ 0.83
TSR1-201ENST00000301364 MED15Q96RN5 788 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 CDC42EP4Q9H3Q1 356 aaKnown RBP20.25■□□□□ 0.83
TSR1-201ENST00000301364 INPP5FQ9Y2H2 1132 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 KIRREL3Q8IZU9 778 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 HDAC7Q8WUI4 952 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 ARP10275 920 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 UGP2Q16851 508 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 ATF7IP2Q5U623 682 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 RFX8Q6ZV50 586 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 IFT43Q96FT9 208 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 NSL1Q96IY1 281 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 KCNK16Q96T55 309 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 MRPL46Q9H2W6 279 aaKnown RBP20.25■□□□□ 0.83
TSR1-201ENST00000301364 GRID1Q9ULK0 1009 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 SIK3Q9Y2K2 1263 aa20.25■□□□□ 0.83
TSR1-201ENST00000301364 MYL3P08590 195 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 MAPTP10636 758 aaKnown RBP20.24■□□□□ 0.83
TSR1-201ENST00000301364 GPD1P21695 349 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 BOLA3Q53S33 107 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 LRRC43Q8N309 656 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 DTX3LQ8TDB6 740 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 DNAJC9Q8WXX5 260 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 ATP9BO43861 1147 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 HSD17B4P51659 736 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 MCL1Q07820 350 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 MTBPQ96DY7 904 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 YY1AP1Q9H869 796 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 PRMT7Q9NVM4 692 aaPredicted RBP20.24■□□□□ 0.83
TSR1-201ENST00000301364 RNF103-CHMP3A0A140T963 221 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 XPAP23025 273 aaPredicted RBP20.24■□□□□ 0.83
TSR1-201ENST00000301364 RGS7P49802 495 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 SLC35C1Q96A29 364 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 TNS2Q63HR2 1409 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 PSMD3O43242 534 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 PRAMEP78395 509 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 KIAA1841Q6NSI8 718 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 ATG4AQ8WYN0 398 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 KIFC3Q9BVG8 833 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 PCMTD2Q9NV79 361 aa20.24■□□□□ 0.83
TSR1-201ENST00000301364 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.24■□□□□ 0.83
TSR1-201ENST00000301364 B2RBV5 119 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 SNX2O60749 519 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 TPI1P60174 286 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 CCNG2Q16589 344 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 E2F7Q96AV8 911 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 MRGBPQ9NV56 204 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 GAS2O43903 313 aaKnown RBP20.23■□□□□ 0.83
TSR1-201ENST00000301364 NQO1P15559 274 aaKnown RBP20.23■□□□□ 0.83
TSR1-201ENST00000301364 NPTX2P47972 431 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 SKOR1P84550 965 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 C1orf131Q8NDD1 294 aaKnown RBP20.23■□□□□ 0.83
TSR1-201ENST00000301364 KLF6Q99612 283 aaPredicted RBP20.23■□□□□ 0.83
TSR1-201ENST00000301364 PHTF1Q9UMS5 762 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 PCDHGC5Q9Y5F6 944 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 BCL9O00512 1426 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 CYTH3O43739 400 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 OTUD5Q96G74 571 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 CLMNQ96JQ2 1002 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 PROSCO94903 275 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 KRT4P19013 534 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 PSMC6P62333 389 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 ERVK-9P63128 1117 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 MED21Q13503 144 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 TRADDQ15628 312 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 PDCD2Q16342 344 aaPredicted RBP20.23■□□□□ 0.83
TSR1-201ENST00000301364 EXD1Q8NHP7 514 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 CMTM5Q96DZ9 223 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 ZNF518BQ9C0D4 1074 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 EML4Q9HC35 981 aaKnown RBP20.23■□□□□ 0.83
TSR1-201ENST00000301364 FBXO28Q9NVF7 368 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 ZBTB12Q9Y330 459 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms