RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 FEZF2Q8TBJ5 459 aa14□□□□□ -0.17
CASC4-201ENST00000299957 VCX3BQ9H321 246 aa14□□□□□ -0.17
CASC4-201ENST00000299957 LUC7L3O95232 432 aaKnown RBP14□□□□□ -0.17
CASC4-201ENST00000299957 GGPS1O95749 300 aa14□□□□□ -0.17
CASC4-201ENST00000299957 COG7P83436 770 aa14□□□□□ -0.17
CASC4-201ENST00000299957 EN1Q05925 392 aaPredicted RBP14□□□□□ -0.17
CASC4-201ENST00000299957 EMC2Q15006 297 aa14□□□□□ -0.17
CASC4-201ENST00000299957 STXBP2Q15833 593 aa14□□□□□ -0.17
CASC4-201ENST00000299957 DUOXA2Q1HG44 320 aa14□□□□□ -0.17
CASC4-201ENST00000299957 RABGAP1LQ5R372 815 aa14□□□□□ -0.17
CASC4-201ENST00000299957 NLRP9Q7RTR0 991 aa14□□□□□ -0.17
CASC4-201ENST00000299957 CRLF3Q8IUI8 442 aa14□□□□□ -0.17
CASC4-201ENST00000299957 LRRC43Q8N309 656 aa14□□□□□ -0.17
CASC4-201ENST00000299957 LRRC57Q8N9N7 239 aa14□□□□□ -0.17
CASC4-201ENST00000299957 HSD17B14Q9BPX1 270 aa14□□□□□ -0.17
CASC4-201ENST00000299957 NDC80O14777 642 aa14□□□□□ -0.17
CASC4-201ENST00000299957 P4HA1P13674 534 aa14□□□□□ -0.17
CASC4-201ENST00000299957 MYL6P60660 151 aa14□□□□□ -0.17
CASC4-201ENST00000299957 OTUD4Q01804 1114 aaKnown RBP14□□□□□ -0.17
CASC4-201ENST00000299957 PTK7Q13308 1070 aa14□□□□□ -0.17
CASC4-201ENST00000299957 VPS72Q15906 364 aa14□□□□□ -0.17
CASC4-201ENST00000299957 UGCGQ16739 394 aa14□□□□□ -0.17
CASC4-201ENST00000299957 CCDC14Q49A88 953 aa14□□□□□ -0.17
CASC4-201ENST00000299957 SH2D4BQ5SQS7 431 aa14□□□□□ -0.17
CASC4-201ENST00000299957 DCAF15Q66K64 600 aa14□□□□□ -0.17
CASC4-201ENST00000299957 ZBTB10Q96DT7 871 aa14□□□□□ -0.17
CASC4-201ENST00000299957 DGAT1O75907 488 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 ADRA1DP25100 572 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 CNGA2Q16280 664 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 FBXO36Q8NEA4 188 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 PSPC1Q8WXF1 523 aaKnown RBP13.99□□□□□ -0.17
CASC4-201ENST00000299957 EXT2Q93063 718 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 AS3MTQ9HBK9 375 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 EME2A4GXA9 379 aaPredicted RBP13.99□□□□□ -0.17
CASC4-201ENST00000299957 CALB1P05937 261 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 RFX1P22670 979 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 FNTAP49354 379 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 YWHAEP62258 255 aaKnown RBP13.99□□□□□ -0.17
CASC4-201ENST00000299957 RCN1Q15293 331 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 SLFN12LQ6IEE8 588 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 ZNF662Q6ZS27 426 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 CCDC125Q86Z20 511 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 PPWD1Q96BP3 646 aaKnown RBP13.99□□□□□ -0.17
CASC4-201ENST00000299957 STOML1Q9UBI4 398 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 A0A0A6YYK5 440 aaPredicted RBP13.99□□□□□ -0.17
CASC4-201ENST00000299957 TRIM49D1C9J1S8 452 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 ATP9BO43861 1147 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 SNX3O60493 162 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 SHOX2O60902 331 aaPredicted RBP13.99□□□□□ -0.17
CASC4-201ENST00000299957 HOXA7P31268 230 aaPredicted RBP13.99□□□□□ -0.17
CASC4-201ENST00000299957 GPC3P51654 580 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 STAT5BP51692 787 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 CAV1Q03135 178 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 THOC5Q13769 683 aaKnown RBP13.99□□□□□ -0.17
CASC4-201ENST00000299957 RRP1BQ14684 758 aaKnown RBP13.99□□□□□ -0.17
CASC4-201ENST00000299957 FAM160B1Q5W0V3 765 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 TMEM154Q6P9G4 183 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 KCNV1Q6PIU1 500 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 SYTL5Q8TDW5 730 aaPredicted RBP13.99□□□□□ -0.17
CASC4-201ENST00000299957 SERPINB12Q96P63 405 aa13.99□□□□□ -0.17
CASC4-201ENST00000299957 UNKQ9C0B0 810 aaKnown RBP13.99□□□□□ -0.17
CASC4-201ENST00000299957 WRAP73Q9P2S5 460 aaPredicted RBP13.99□□□□□ -0.17
CASC4-201ENST00000299957 O00370 1275 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 ENTPD5O75356 428 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 TCN1P20061 433 aaPredicted RBP13.98□□□□□ -0.17
CASC4-201ENST00000299957 SLC12A2P55011 1212 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 ACTR2P61160 394 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 ROR1Q01973 937 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 NME3Q13232 169 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 KCTD2Q14681 263 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 MCOLN2Q8IZK6 566 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 RYBPQ8N488 228 aaPredicted RBP13.98□□□□□ -0.17
CASC4-201ENST00000299957 CCNYL1Q8N7R7 359 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 KREMEN1Q96MU8 473 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 RPS6KC1Q96S38 1066 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 MOV10L1Q9BXT6 1211 aaKnown RBP13.98□□□□□ -0.17
CASC4-201ENST00000299957 ZC3H7BQ9UGR2 993 aaKnown RBP13.98□□□□□ -0.17
CASC4-201ENST00000299957 MED1Q15648 1581 aaPredicted RBP13.98□□□□□ -0.17
CASC4-201ENST00000299957 PRRC2BQ5JSZ5 2229 aaKnown RBP13.98□□□□□ -0.17
CASC4-201ENST00000299957 PSMD10O75832 226 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 DGKIO75912 1065 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 KRT16P08779 473 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 LCP1P13796 627 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 SFNP31947 248 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 FMO1Q01740 532 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 CUL2Q13617 745 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 FAM47CQ5HY64 1035 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 CHADLQ6NUI6 762 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 RNF135Q8IUD6 432 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 TRAPPC12Q8WVT3 735 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 FAM163AQ96GL9 167 aaPredicted RBP13.98□□□□□ -0.17
CASC4-201ENST00000299957 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.98□□□□□ -0.17
CASC4-201ENST00000299957 PSMC3IPQ9P2W1 217 aaPredicted RBP13.98□□□□□ -0.17
CASC4-201ENST00000299957 AGAP1Q9UPQ3 857 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 C2orf71A6NGG8 1288 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 ANXA13P27216 316 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 ASPHQ12797 758 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 NBPF20Q3BBV1 942 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 GLRA4Q5JXX5 417 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 UBAP2Q5T6F2 1119 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms