RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 CDR2Q01850 454 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 SKIV2LQ15477 1246 aaKnown RBP10.75□□□□□ -0.69
GABRB3-201ENST00000299267 DUSP28Q4G0W2 176 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 SLC27A1Q6PCB7 646 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 TAOK1Q7L7X3 1001 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 MAML3Q96JK9 1138 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 ZCCHC17Q9NP64 241 aaKnown RBP10.75□□□□□ -0.69
GABRB3-201ENST00000299267 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.75□□□□□ -0.69
GABRB3-201ENST00000299267 FAN1Q9Y2M0 1017 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 CDY2AQ9Y6F7 541 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 GLI3P10071 1580 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 CCDC188H7C350 402 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 TREHO43280 583 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 MAFO75444 373 aaPredicted RBP10.75□□□□□ -0.69
GABRB3-201ENST00000299267 AP1G2O75843 785 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 INHBAP08476 426 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 EFHC2Q5JST6 749 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 FBXO47Q5MNV8 452 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 CEP128Q6ZU80 1094 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 MIB1Q86YT6 1006 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 PDIK1LQ8N165 341 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 SKA2Q8WVK7 121 aaPredicted RBP10.75□□□□□ -0.69
GABRB3-201ENST00000299267 APBA2Q99767 749 aa10.75□□□□□ -0.69
GABRB3-201ENST00000299267 LTBP3Q9NS15 1303 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 NFICP08651 508 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 PCSK1P29120 753 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 NDST1P52848 882 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 VSNL1P62760 191 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 GTF2BQ00403 316 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 CDK17Q00537 523 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 TMED2Q15363 201 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 TAF2Q6P1X5 1199 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 ANKRD23Q86SG2 305 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 ZSWIM2Q8NEG5 633 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 PYROXD1Q8WU10 500 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 LENG9Q96B70 501 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 TMEM169Q96HH4 297 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 GPATCH2LQ9NWQ4 482 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 PHBP35232 272 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 EPHB1P54762 984 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 GNGT1P63211 74 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 ZBTB41Q5SVQ8 909 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 ANKS4BQ8N8V4 417 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 USP33Q8TEY7 942 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 SH3TC2Q8TF17 1288 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 ZNF606Q8WXB4 792 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 GCNAQ96QF7 691 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 WNT8AQ9H1J5 351 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.74□□□□□ -0.69
GABRB3-201ENST00000299267 NRCAMQ92823 1304 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 WDR91A4D1P6 747 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 ARIH2O95376 493 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 ZBTB48P10074 688 aaPredicted RBP10.74□□□□□ -0.69
GABRB3-201ENST00000299267 MAPTP10636 758 aaKnown RBP10.74□□□□□ -0.69
GABRB3-201ENST00000299267 KRT10P13645 584 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 SMPD1P17405 629 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 SCNN1GP51170 649 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 ZKSCAN8Q15776 578 aaPredicted RBP10.74□□□□□ -0.69
GABRB3-201ENST00000299267 MIIPQ5JXC2 388 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 PHLDB3Q6NSJ2 640 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 ZPBP2Q6X784 338 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 WDR49Q8IV35 697 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 TTC39CQ8N584 583 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 DPF3Q92784 378 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 CDT1Q9H211 546 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 KCTD10Q9H3F6 313 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 UVRAGQ9P2Y5 699 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 DFFAO00273 331 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 TMEM253P0C7T8 217 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 FAM200BP0CF97 657 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 IRF1P10914 325 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 CD52P31358 61 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 MLH1P40692 756 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 PRKCZQ05513 592 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 MTHFD1LQ6UB35 978 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 LRRC31Q6UY01 552 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 B4GALNT4Q76KP1 1039 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 PID1Q7Z2X4 250 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 BRSK2Q8IWQ3 736 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 ADGRF2Q8IZF7 708 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 TMEM39AQ9NV64 488 aa10.74□□□□□ -0.69
GABRB3-201ENST00000299267 NOVA2Q9UNW9 492 aaKnown RBP10.74□□□□□ -0.69
GABRB3-201ENST00000299267 NFASCO94856 1347 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 ITGB4P16144 1822 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 OPLAHO14841 1288 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 MAP3K7CLP57077 242 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 PTPN11Q06124 597 aaPredicted RBP10.73□□□□□ -0.69
GABRB3-201ENST00000299267 KCNMA1Q12791 1236 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 TSTA3Q13630 321 aaPredicted RBP10.73□□□□□ -0.69
GABRB3-201ENST00000299267 PRPSAP1Q14558 356 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 ACAD10Q6JQN1 1059 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 ATG4AQ8WYN0 398 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 MLXIPLQ9NP71 852 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.73□□□□□ -0.69
GABRB3-201ENST00000299267 NUDT5Q9UKK9 219 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 LRRC10BA6NIK2 292 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 CST8O60676 142 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 MYBL1P10243 752 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 ARF4P18085 180 aaPredicted RBP10.73□□□□□ -0.69
GABRB3-201ENST00000299267 XPAP23025 273 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms