RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 DHX33Q9H6R0 707 aaKnown RBP9.87□□□□□ -0.83
PRDM9-201ENST00000296682 LRRC4CQ9HCJ2 640 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 CPA4Q9UI42 421 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 ZNF112Q9UJU3 913 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 R3HDM2Q9Y2K5 976 aaKnown RBP9.87□□□□□ -0.83
PRDM9-201ENST00000296682 NCANO14594 1321 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 PHF2O75151 1096 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 VNN1O95497 513 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 ADORA2AP29274 412 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 PSMD6Q15008 389 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 ARMCX2Q7L311 632 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 CATSPER4Q7RTX7 472 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 RASGEF1CQ8N431 466 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 TMEM35BQ8NCS4 154 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 MRPL47Q9HD33 250 aaKnown RBP9.87□□□□□ -0.83
PRDM9-201ENST00000296682 ANK1P16157 1881 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 LTBP3Q9NS15 1303 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 M0QYV0 167 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 PDHXO00330 501 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 OGTO15294 1046 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 CYP2B6P20813 491 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 POLR2BP30876 1174 aaKnown RBP9.86□□□□□ -0.83
PRDM9-201ENST00000296682 CHRNA3P32297 505 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 PTENP60484 403 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 IFI35P80217 286 aaPredicted RBP9.86□□□□□ -0.83
PRDM9-201ENST00000296682 PPP6R3Q5H9R7 873 aaPredicted RBP9.86□□□□□ -0.83
PRDM9-201ENST00000296682 IER5Q5VY09 327 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 ZC3H18Q86VM9 953 aaKnown RBP9.86□□□□□ -0.83
PRDM9-201ENST00000296682 NTPCRQ9BSD7 190 aaKnown RBP9.86□□□□□ -0.83
PRDM9-201ENST00000296682 OSBPL8Q9BZF1 889 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 SMARCAD1Q9H4L7 1026 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 KCNG1Q9UIX4 513 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 MAFBQ9Y5Q3 323 aaPredicted RBP9.86□□□□□ -0.83
PRDM9-201ENST00000296682 SNX9Q9Y5X1 595 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 A0A0B4J269 797 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 MYO1CO00159 1063 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 C4BPAP04003 597 aaKnown RBP9.86□□□□□ -0.83
PRDM9-201ENST00000296682 NFICP08651 508 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 ZNF844Q08AG5 666 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 MTMR3Q13615 1198 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 BSPRYQ5W0U4 402 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 CRELD2Q6UXH1 353 aaPredicted RBP9.86□□□□□ -0.83
PRDM9-201ENST00000296682 IQCKQ8N0W5 287 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 ARFGAP2Q8N6H7 521 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 GPRC5AQ8NFJ5 357 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 OR6B3Q8NGW1 331 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.86□□□□□ -0.83
PRDM9-201ENST00000296682 TCP11Q8WWU5 503 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 KIF12Q96FN5 646 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 ADPGKQ9BRR6 497 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 UVRAGQ9P2Y5 699 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 MAGED2Q9UNF1 606 aaPredicted RBP9.86□□□□□ -0.83
PRDM9-201ENST00000296682 MRPL42Q9Y6G3 142 aaKnown RBP9.86□□□□□ -0.83
PRDM9-201ENST00000296682 RASGRF2O14827 1237 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 ANKMY2Q8IV38 441 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 ZDHHC14Q8IZN3 488 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 ABRAQ8N0Z2 381 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 GPR20Q99678 358 aa9.86□□□□□ -0.83
PRDM9-201ENST00000296682 MAK16Q9BXY0 300 aaKnown RBP9.86□□□□□ -0.83
PRDM9-201ENST00000296682 STAG3L1P0CL83 205 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 EFNA5P52803 228 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 ITGA8P53708 1063 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 MXD4Q14582 209 aaPredicted RBP9.85□□□□□ -0.83
PRDM9-201ENST00000296682 CELF3Q5SZQ8 465 aaKnown RBP9.85□□□□□ -0.83
PRDM9-201ENST00000296682 FASTKD5Q7L8L6 764 aaKnown RBP9.85□□□□□ -0.83
PRDM9-201ENST00000296682 TMC3Q7Z5M5 1100 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 RHOT1Q8IXI2 618 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 KIAA0319LQ8IZA0 1049 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 NETO2Q8NC67 525 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 CABS1Q96KC9 395 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 CGRRF1Q99675 332 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 ERAP1Q9NZ08 941 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 HEY1Q9Y5J3 304 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.85□□□□□ -0.83
PRDM9-201ENST00000296682 LACTBL1A8MY62 500 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 PPFIA4O75335 1185 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 STBD1O95210 358 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 KRT3P12035 628 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 AKAP5P24588 427 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 LSP1P33241 339 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 RFC5P40937 340 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 CCNA1P78396 465 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 GCNT1Q02742 428 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 IFRD2Q12894 506 aaPredicted RBP9.85□□□□□ -0.83
PRDM9-201ENST00000296682 GPS1Q13098 491 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 SNAPC2Q13487 334 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 SEPT7Q16181 437 aaKnown RBP9.85□□□□□ -0.83
PRDM9-201ENST00000296682 FAM102AQ5T9C2 384 aaPredicted RBP9.85□□□□□ -0.83
PRDM9-201ENST00000296682 RFX6Q8HWS3 928 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 CD302Q8IX05 232 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 C12orf29Q8N999 325 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 KCTD6Q8NC69 237 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 FEZF2Q8TBJ5 459 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 FAM167AQ96KS9 214 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 OSMRQ99650 979 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 CTNNAL1Q9UBT7 734 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 MYPNQ86TC9 1320 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 H3BRB1 525 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 YBX3P16989 372 aaKnown RBP eCLIP9.85□□□□□ -0.83
PRDM9-201ENST00000296682 KRT15P19012 456 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms