RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 KCNE1P15382 129 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 GRK4P32298 578 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 PTK7Q13308 1070 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 ELF2Q15723 593 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 CTAGE6Q86UF2 777 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 CTAGE4Q8IX94 777 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 COG1Q8WTW3 980 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 NCAPGQ9BPX3 1015 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 CHST12Q9NRB3 414 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 ST3GAL5Q9UNP4 418 aa16.58■□□□□ 0.24
LSM6-201ENST00000296581 CFHP08603 1231 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 CTSHP09668 335 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 AKAP5P24588 427 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 TUBB4BP68371 445 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 NOMO3P69849 1222 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 PPP1R2P3Q6NXS1 205 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 FBXO38Q6PIJ6 1188 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 CNPY4Q8N129 248 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 BEST2Q8NFU1 509 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 ZNF653Q96CK0 615 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 CYFIP2Q96F07 1278 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 MMS19Q96T76 1030 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 APOL6Q9BWW8 343 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 RNF39Q9H2S5 420 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 GOLPH3Q9H4A6 298 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 CTTNBP2NLQ9P2B4 639 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 UBQLN1Q9UMX0 589 aaKnown RBP16.57■□□□□ 0.24
LSM6-201ENST00000296581 SCN1AP35498 2009 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 FAM170AA1A519 330 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 KIF4AO95239 1232 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 TRIM71Q2Q1W2 868 aaKnown RBP16.57■□□□□ 0.24
LSM6-201ENST00000296581 TWF2Q6IBS0 349 aaKnown RBP16.57■□□□□ 0.24
LSM6-201ENST00000296581 ZNF572Q7Z3I7 529 aaPredicted RBP16.57■□□□□ 0.24
LSM6-201ENST00000296581 DAAM2Q86T65 1068 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 NT5DC3Q86UY8 548 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 MCOLN2Q8IZK6 566 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 TRIM11Q96F44 468 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 RPGRIP1Q96KN7 1286 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 CAPZA3Q96KX2 299 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 SMYD3Q9H7B4 428 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 ZNF446Q9NWS9 450 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 TUBGCP4Q9UGJ1 667 aa16.57■□□□□ 0.24
LSM6-201ENST00000296581 SMIM28A0A1B0GU29 152 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 PAEPP09466 180 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 THPOP40225 353 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 RAP1GAPP47736 663 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 RPS6KA1Q15418 735 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 FAM26DQ5JW98 314 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 NAA35Q5VZE5 725 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 C11orf63Q6NUN7 778 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 PEX26Q7Z412 305 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 LRRC52Q8N7C0 313 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 RABGGTAQ92696 567 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 GLT1D1Q96MS3 346 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 ZSWIM1Q9BR11 485 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 AVENQ9NQS1 362 aaPredicted RBP16.56■□□□□ 0.24
LSM6-201ENST00000296581 UVRAGQ9P2Y5 699 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 PCDHGC3Q9UN70 934 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 PACSIN2Q9UNF0 486 aaPredicted RBP16.56■□□□□ 0.24
LSM6-201ENST00000296581 PTCH2Q9Y6C5 1203 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 PDE2AO00408 941 aaPredicted RBP16.56■□□□□ 0.24
LSM6-201ENST00000296581 CES2O00748 559 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 CILPO75339 1184 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 MYBL1P10243 752 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 NSFP46459 744 aaKnown RBP16.56■□□□□ 0.24
LSM6-201ENST00000296581 CDH8P55286 799 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 MYO1EQ12965 1108 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 MON1BQ7L1V2 547 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 PHF13Q86YI8 300 aaPredicted RBP16.56■□□□□ 0.24
LSM6-201ENST00000296581 WHAMMQ8TF30 809 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 CPA5Q8WXQ8 436 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 C18orf25Q96B23 403 aaPredicted RBP16.56■□□□□ 0.24
LSM6-201ENST00000296581 ERVK-5Q9HDB9 667 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 TRMT13Q9NUP7 481 aaKnown RBP16.56■□□□□ 0.24
LSM6-201ENST00000296581 RNF14Q9UBS8 474 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 PARP2Q9UGN5 583 aa16.56■□□□□ 0.24
LSM6-201ENST00000296581 GPR182O15218 404 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 ATMINO43313 823 aaPredicted RBP16.55■□□□□ 0.24
LSM6-201ENST00000296581 LSM8O95777 96 aaKnown RBP16.55■□□□□ 0.24
LSM6-201ENST00000296581 CXCR5P32302 372 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 RAD23BP54727 409 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 INCA1Q0VD86 236 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 ZNF394Q53GI3 561 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 GLRA4Q5JXX5 417 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 FBXO47Q5MNV8 452 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 TEX35Q5T0J7 233 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 TTC39CQ8N584 583 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 SLC43A3Q8NBI5 491 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 ARRDC4Q8NCT1 418 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 TFAP2BQ92481 460 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 HES6Q96HZ4 224 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 VCPIP1Q96JH7 1222 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 PSMB7Q99436 277 aa16.55■□□□□ 0.24
LSM6-201ENST00000296581 AGO3Q9H9G7 860 aaKnown RBP16.55■□□□□ 0.24
LSM6-201ENST00000296581 CNOT8Q9UFF9 292 aaKnown RBP16.55■□□□□ 0.24
LSM6-201ENST00000296581 XPOTO43592 962 aaKnown RBP16.54■□□□□ 0.24
LSM6-201ENST00000296581 CD4P01730 458 aa16.54■□□□□ 0.24
LSM6-201ENST00000296581 CYP3A5P20815 502 aa16.54■□□□□ 0.24
LSM6-201ENST00000296581 CDH5P33151 784 aaPredicted RBP16.54■□□□□ 0.24
LSM6-201ENST00000296581 TNNC1P63316 161 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms