RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 PRKAG3Q9UGI9 489 aa13.03□□□□□ -0.32
HMGB2-201ENST00000296503 ARHGEF37A1IGU5 675 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 KPNA7A9QM74 516 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 CYB561D2O14569 222 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 RFPL2O75678 378 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 ODC1P11926 461 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 PNPLA4P41247 253 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 MTHFRP42898 656 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 AARSP49588 968 aaKnown RBP eCLIP13.02□□□□□ -0.321e-323■■□□□ 12.8
HMGB2-201ENST00000296503 CBX2Q14781 532 aaPredicted RBP13.02□□□□□ -0.32
HMGB2-201ENST00000296503 PSMD6Q15008 389 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 SV2CQ496J9 727 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 CEP135Q66GS9 1140 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 METTL23Q86XA0 190 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 WDR49Q8IV35 697 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 SLC9A9Q8IVB4 645 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 OR5B17Q8NGF7 314 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 MFSD14AQ96MC6 490 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 ZNF560Q96MR9 790 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 DMAC2Q9NW81 257 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 CDH22Q9UJ99 828 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 FBXL5Q9UKA1 691 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 ITGA11Q9UKX5 1188 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 TRAF3IP3Q9Y228 551 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 FRMD4BQ9Y2L6 1034 aa13.02□□□□□ -0.32
HMGB2-201ENST00000296503 RPL13P26373 211 aaKnown RBP13.02□□□□□ -0.33
HMGB2-201ENST00000296503 ELF1P32519 619 aa13.02□□□□□ -0.33
HMGB2-201ENST00000296503 PRCPP42785 496 aa13.02□□□□□ -0.33
HMGB2-201ENST00000296503 BFSP1Q12934 665 aa13.02□□□□□ -0.33
HMGB2-201ENST00000296503 LIN9Q5TKA1 542 aa13.02□□□□□ -0.33
HMGB2-201ENST00000296503 OVOS1Q6IE37 1185 aa13.02□□□□□ -0.33
HMGB2-201ENST00000296503 GPR149Q86SP6 731 aa13.02□□□□□ -0.33
HMGB2-201ENST00000296503 ADHFE1Q8IWW8 467 aa13.02□□□□□ -0.33
HMGB2-201ENST00000296503 GJD3Q8N144 294 aa13.02□□□□□ -0.33
HMGB2-201ENST00000296503 SPATA20Q8TB22 786 aa13.02□□□□□ -0.33
HMGB2-201ENST00000296503 SUSD6Q92537 303 aa13.02□□□□□ -0.33
HMGB2-201ENST00000296503 RPGRIP1Q96KN7 1286 aa13.02□□□□□ -0.33
HMGB2-201ENST00000296503 PHF7Q9BWX1 381 aaPredicted RBP13.02□□□□□ -0.33
HMGB2-201ENST00000296503 PIDD1Q9HB75 910 aa13.02□□□□□ -0.33
HMGB2-201ENST00000296503 TBC1D4O60343 1298 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 OAZ2O95190 189 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 PTMAP06454 111 aaKnown RBP13.01□□□□□ -0.33
HMGB2-201ENST00000296503 CPB1P15086 417 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 TYMPP19971 482 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 NR2F2P24468 414 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 CASP4P49662 377 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 ROR1Q01973 937 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 MYO1EQ12965 1108 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 ADAM9Q13443 819 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 MYBPC2Q14324 1141 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 CAMK4Q16566 473 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 PPM1LQ5SGD2 360 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 SLC8B1Q6J4K2 584 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 TRAPPC11Q7Z392 1133 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 THEM5Q8N1Q8 247 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 ZNF461Q8TAF7 563 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 NECTIN4Q96NY8 510 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 CGRRF1Q99675 332 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 FBXW11Q9UKB1 542 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 DSEQ9UL01 958 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 PTPRJQ12913 1337 aa13.01□□□□□ -0.33
HMGB2-201ENST00000296503 SCN1AP35498 2009 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 PLXNA3P51805 1871 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 TNFRSF10AO00220 468 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 CTIFO43310 598 aaKnown RBP13□□□□□ -0.33
HMGB2-201ENST00000296503 PHACTR2O75167 634 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 ZMYND10O75800 440 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 C8AP07357 584 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 STIM1Q13586 685 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 SCARA3Q6AZY7 606 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 C15orf39Q6ZRI6 1047 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 LRRC52Q8N7C0 313 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 CMASQ8NFW8 434 aaPredicted RBP13□□□□□ -0.33
HMGB2-201ENST00000296503 TMEM174Q8WUU8 243 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 ANKRD7Q92527 254 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 SMG7Q92540 1137 aaKnown RBP13□□□□□ -0.33
HMGB2-201ENST00000296503 BORCS6Q96GS4 357 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 TSG101Q99816 390 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 OXCT2Q9BYC2 517 aaPredicted RBP13□□□□□ -0.33
HMGB2-201ENST00000296503 MAN1B1Q9UKM7 699 aa13□□□□□ -0.33
HMGB2-201ENST00000296503 MTCL1Q9Y4B5 1905 aaKnown RBP13□□□□□ -0.33
HMGB2-201ENST00000296503 WDR27A2RRH5 827 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 BIN1O00499 593 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 HUS1O60921 280 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 ABLIM3O94929 683 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 CST3P01034 146 aaPredicted RBP12.99□□□□□ -0.33
HMGB2-201ENST00000296503 SP100P23497 879 aaPredicted RBP12.99□□□□□ -0.33
HMGB2-201ENST00000296503 ZP2Q05996 745 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 TRPC3Q13507 836 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 WSCD1Q658N2 575 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 CCDC149Q6ZUS6 474 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 SLC7A14Q8TBB6 771 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 FEZF2Q8TBJ5 459 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 PARD3BQ8TEW8 1205 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 ZNF516Q92618 1163 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 HPDLQ96IR7 371 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 PRKD2Q9BZL6 878 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 POMKQ9H5K3 350 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 CYP4F11Q9HBI6 524 aa12.99□□□□□ -0.33
HMGB2-201ENST00000296503 ZDHHC7Q9NXF8 308 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms