RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 RWDD4Q6NW29 188 aaKnown RBP12.28□□□□□ -0.44
SNIP1-201ENST00000296215 SLC7A3Q8WY07 619 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 WRNIP1Q96S55 665 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 ERP44Q9BS26 406 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 BRD7Q9NPI1 651 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 FANCFQ9NPI8 374 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 CNOT8Q9UFF9 292 aaKnown RBP12.28□□□□□ -0.44
SNIP1-201ENST00000296215 SNX13Q9Y5W8 968 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 GOLGA8SH3BPF8 625 aa12.27□□□□□ -0.44
SNIP1-201ENST00000296215 SLC1A4P43007 532 aa12.27□□□□□ -0.44
SNIP1-201ENST00000296215 ZAP70P43403 619 aa12.27□□□□□ -0.44
SNIP1-201ENST00000296215 VAC14Q08AM6 782 aa12.27□□□□□ -0.44
SNIP1-201ENST00000296215 OR52E8Q6IFG1 317 aa12.27□□□□□ -0.44
SNIP1-201ENST00000296215 GALNT18Q6P9A2 607 aa12.27□□□□□ -0.44
SNIP1-201ENST00000296215 SV2BQ7L1I2 683 aa12.27□□□□□ -0.44
SNIP1-201ENST00000296215 TMC3Q7Z5M5 1100 aa12.27□□□□□ -0.44
SNIP1-201ENST00000296215 NET1Q7Z628 596 aaPredicted RBP12.27□□□□□ -0.44
SNIP1-201ENST00000296215 ASCC1Q8N9N2 400 aaKnown RBP12.27□□□□□ -0.44
SNIP1-201ENST00000296215 ATL1Q8WXF7 558 aa12.27□□□□□ -0.44
SNIP1-201ENST00000296215 S100ZQ8WXG8 99 aa12.27□□□□□ -0.44
SNIP1-201ENST00000296215 FAM96AQ9H5X1 160 aa12.27□□□□□ -0.44
SNIP1-201ENST00000296215 SAYSD1Q9NPB0 183 aa12.27□□□□□ -0.44
SNIP1-201ENST00000296215 COPEO14579 308 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 ZW10O43264 779 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 OR6B1O95007 311 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 TOP3BO95985 862 aaKnown RBP12.27□□□□□ -0.45
SNIP1-201ENST00000296215 CSTF3Q12996 717 aaKnown RBP12.27□□□□□ -0.45
SNIP1-201ENST00000296215 CCDC85BQ15834 202 aaPredicted RBP12.27□□□□□ -0.45
SNIP1-201ENST00000296215 SLC45A4Q5BKX6 768 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 IRGQQ8WZA9 623 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 VTI1AQ96AJ9 217 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 EPB41L1Q9H4G0 881 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 EBF3Q9H4W6 596 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 MBD2Q9UBB5 411 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 BTBD3Q9Y2F9 522 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 LRRC53A6NM62 1247 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 BTBD18B2RXH4 712 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 TK2O00142 265 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 AKAP10O43572 662 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 ALOX12P18054 663 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 RRM1P23921 792 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 ZNF132P52740 706 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 COPAP53621 1224 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 ABATP80404 500 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 TOMM20Q15388 145 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 ARMC4Q5T2S8 1044 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 ALKBH5Q6P6C2 394 aaKnown RBP12.27□□□□□ -0.45
SNIP1-201ENST00000296215 RIPOR1Q6ZS17 1223 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 MMAAQ8IVH4 418 aaKnown RBP12.27□□□□□ -0.45
SNIP1-201ENST00000296215 LILRB4Q8NHJ6 448 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 PDCD6IPQ8WUM4 868 aaKnown RBP12.27□□□□□ -0.45
SNIP1-201ENST00000296215 AKAP1Q92667 903 aaKnown RBP eCLIP12.27□□□□□ -0.45
SNIP1-201ENST00000296215 SRPK1Q96SB4 655 aaKnown RBP12.27□□□□□ -0.45
SNIP1-201ENST00000296215 TCEAL9Q9UHQ7 104 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 SPATA2Q9UM82 520 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 PA2G4Q9UQ80 394 aaKnown RBP12.27□□□□□ -0.45
SNIP1-201ENST00000296215 BAIAP2Q9UQB8 552 aa12.27□□□□□ -0.45
SNIP1-201ENST00000296215 LOC100653049A0A140TA62 436 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 GNGT2O14610 69 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 UGT1A9O60656 530 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 KRT34O76011 436 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 TTLL1O95922 423 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 UGT1A6P19224 532 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 UGT1A1P22309 533 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 UGT1A4P22310 534 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 UGT1A3P35503 534 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 UGT1A5P35504 534 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 ECT2LQ008S8 904 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 TOP3AQ13472 1001 aaPredicted RBP12.26□□□□□ -0.45
SNIP1-201ENST00000296215 BTG3Q14201 252 aaPredicted RBP12.26□□□□□ -0.45
SNIP1-201ENST00000296215 COL19A1Q14993 1142 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 LVRNQ6Q4G3 990 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 PIGWQ7Z7B1 504 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 LUZP2Q86TE4 346 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 TRIM59Q8IWR1 403 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 PSMA8Q8TAA3 256 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 CMTM5Q96DZ9 223 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 PAGE5Q96GU1 130 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 UGT1A7Q9HAW7 530 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 UGT1A10Q9HAW8 530 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 UGT1A8Q9HAW9 530 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 AVENQ9NQS1 362 aaPredicted RBP12.26□□□□□ -0.45
SNIP1-201ENST00000296215 A0A0D9SFI3 127 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 K7EPI3 171 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 MUSKO15146 869 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 KLHL2O95198 593 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 ALDH1A3P47895 512 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 MAN2A1Q16706 1144 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 GARNL3Q5VVW2 1013 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 GBA3Q9H227 469 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 TMEM245Q9H330 911 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 PRDM11Q9NQV5 511 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 TAGLN3Q9UI15 199 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 AP4B1Q9Y6B7 739 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 SAC3D1A6NKF1 404 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 H3BNX3 289 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 PDPK1O15530 556 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 LPXNO60711 386 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 GPC4O75487 556 aa12.26□□□□□ -0.45
SNIP1-201ENST00000296215 TNNC2P02585 160 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms