RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ECM2O94769 699 aaPredicted RBP9.75□□□□□ -0.85
PDPN-201ENST00000294489 RPLP2P05387 115 aaKnown RBP9.75□□□□□ -0.85
PDPN-201ENST00000294489 NFICP08651 508 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 COMTP21964 271 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 ZNF200P98182 395 aaPredicted RBP9.75□□□□□ -0.85
PDPN-201ENST00000294489 PAK2Q13177 524 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 ZBTB6Q15916 424 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 MAATS1Q7Z4T9 603 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 CDR2LQ86X02 465 aaPredicted RBP9.75□□□□□ -0.85
PDPN-201ENST00000294489 C1orf127Q8N9H9 656 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 PXYLP1Q8TE99 480 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 TMEM40Q8WWA1 233 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 DNAJB3Q8WWF6 145 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 NIF3L1Q9GZT8 377 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 SLITRK6Q9H5Y7 841 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 ST7Q9NRC1 585 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 CHORDC1Q9UHD1 332 aaPredicted RBP9.75□□□□□ -0.85
PDPN-201ENST00000294489 POLR3GO15318 223 aaPredicted RBP9.75□□□□□ -0.85
PDPN-201ENST00000294489 SART1O43290 800 aaKnown RBP9.75□□□□□ -0.85
PDPN-201ENST00000294489 RAD51CO43502 376 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 RARBP10826 455 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 OSTNP61366 133 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 UBXN11Q5T124 520 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 NOTUMQ6P988 496 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 SND1Q7KZF4 910 aaKnown RBP eCLIP9.75□□□□□ -0.85
PDPN-201ENST00000294489 MCOLN2Q8IZK6 566 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 C7orf31Q8N865 590 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 GDAP1L1Q96MZ0 367 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 SCLT1Q96NL6 688 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 PPP1R16BQ96T49 567 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 ZSWIM1Q9BR11 485 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 MED4Q9NPJ6 270 aa9.75□□□□□ -0.85
PDPN-201ENST00000294489 AVENQ9NQS1 362 aaPredicted RBP9.75□□□□□ -0.85
PDPN-201ENST00000294489 CCDC66A2RUB6 948 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 THAP12O43422 761 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 C6orf222P0C671 652 aaPredicted RBP9.74□□□□□ -0.85
PDPN-201ENST00000294489 CCND3P30281 292 aaPredicted RBP9.74□□□□□ -0.85
PDPN-201ENST00000294489 CENPCQ03188 943 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 MGAT3Q09327 533 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 LIN9Q5TKA1 542 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 NAA35Q5VZE5 725 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 SERINC5Q86VE9 423 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 CPA5Q8WXQ8 436 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 IFT81Q8WYA0 676 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 SNX27Q96L92 541 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 ACAP3Q96P50 834 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 ADPGKQ9BRR6 497 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 FAM49AQ9H0Q0 323 aaPredicted RBP9.74□□□□□ -0.85
PDPN-201ENST00000294489 CNTN3Q9P232 1028 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 ITGA11Q9UKX5 1188 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 HPCAL4Q9UM19 191 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 CALCAP01258 141 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 HMGCRP04035 888 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 HSPA6P17066 643 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 HOXD10P28358 340 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 YWHAEP62258 255 aaKnown RBP9.74□□□□□ -0.85
PDPN-201ENST00000294489 NNTQ13423 1086 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 ZNF699Q32M78 642 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 NBPF20Q3BBV1 942 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 GNASQ5JWF2 1037 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 SEL1L2Q5TEA6 688 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 DCAF12L1Q5VU92 463 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.74□□□□□ -0.85
PDPN-201ENST00000294489 ALG3Q92685 438 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 CYFIP2Q96F07 1278 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 OSMRQ99650 979 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 PLVAPQ9BX97 442 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 DDX47Q9H0S4 455 aaKnown RBP9.74□□□□□ -0.85
PDPN-201ENST00000294489 GRIN2DO15399 1336 aa9.74□□□□□ -0.85
PDPN-201ENST00000294489 FAM193AP78312 1265 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 EIF1ADQ8N9N8 165 aaKnown RBP9.73□□□□□ -0.85
PDPN-201ENST00000294489 CAVIN3Q969G5 261 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 VCPIP1Q96JH7 1222 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 CELF4Q9BZC1 486 aaKnown RBP9.73□□□□□ -0.85
PDPN-201ENST00000294489 SPC25Q9HBM1 224 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 ANAPC7Q9UJX3 599 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 MYO1FO00160 1098 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 NPTXRO95502 500 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 PGK1P00558 417 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 PRKAR2AP13861 404 aaKnown RBP9.73□□□□□ -0.85
PDPN-201ENST00000294489 FGFR4P22455 802 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 CDH5P33151 784 aaPredicted RBP9.73□□□□□ -0.85
PDPN-201ENST00000294489 CTNNA1P35221 906 aaKnown RBP9.73□□□□□ -0.85
PDPN-201ENST00000294489 CARSP49589 748 aaKnown RBP9.73□□□□□ -0.85
PDPN-201ENST00000294489 MRPS6P82932 125 aaKnown RBP9.73□□□□□ -0.85
PDPN-201ENST00000294489 PTPN11Q06124 597 aaPredicted RBP9.73□□□□□ -0.85
PDPN-201ENST00000294489 ZNF211Q13398 564 aaPredicted RBP9.73□□□□□ -0.85
PDPN-201ENST00000294489 CUL1Q13616 776 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 TMEM132DQ14C87 1099 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 GDF6Q6KF10 455 aaPredicted RBP9.73□□□□□ -0.85
PDPN-201ENST00000294489 CATSPER4Q7RTX7 472 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 FAM71BQ8TC56 605 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 BTBD6Q96KE9 485 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 EIF2AQ9BY44 585 aaKnown RBP9.73□□□□□ -0.85
PDPN-201ENST00000294489 SENP6Q9GZR1 1112 aaPredicted RBP9.73□□□□□ -0.85
PDPN-201ENST00000294489 PLEKHA4Q9H4M7 779 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 MRPL47Q9HD33 250 aaKnown RBP9.73□□□□□ -0.85
PDPN-201ENST00000294489 XPNPEP3Q9NQH7 507 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 CISHQ9NSE2 258 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 SAGE1Q9NXZ1 904 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms