RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 PLA2G4AP47712 749 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 CDK8P49336 464 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 CLK2P49760 499 aaKnown RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 PTH1RQ03431 593 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 VAC14Q08AM6 782 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 POLD3Q15054 466 aaPredicted RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 MRPL1Q9BYD6 325 aaKnown RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 GCFC2P16383 781 aaKnown RBP12.98□□□□□ -0.33
SLX4-201ENST00000294008 PRKAA1Q13131 559 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 TMEM132DQ14C87 1099 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 GLB1LQ6UWU2 654 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 CEP68Q76N32 757 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 LRRC8AQ8IWT6 810 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.98□□□□□ -0.33
SLX4-201ENST00000294008 RRP15Q9Y3B9 282 aaKnown RBP12.98□□□□□ -0.33
SLX4-201ENST00000294008 DENND4BO75064 1496 aaPredicted RBP12.98□□□□□ -0.33
SLX4-201ENST00000294008 UHRF1BP1LA0JNW5 1464 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 APRTP07741 180 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 GABPB1Q06547 395 aaPredicted RBP12.98□□□□□ -0.33
SLX4-201ENST00000294008 AMHR2Q16671 573 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 FOXP4Q8IVH2 680 aaPredicted RBP12.98□□□□□ -0.33
SLX4-201ENST00000294008 MYRIPQ8NFW9 859 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 C19orf60Q96EN9 201 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 CELF2O95319 508 aaKnown RBP12.98□□□□□ -0.33
SLX4-201ENST00000294008 YY1P25490 414 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 YWHABP31946 246 aaKnown RBP12.98□□□□□ -0.33
SLX4-201ENST00000294008 FAAH2Q6GMR7 532 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 CSGALNACT1Q8TDX6 532 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 ECSITQ9BQ95 431 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 PDCD10Q9BUL8 212 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 FEM1BQ9UK73 627 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 DYRK1BQ9Y463 629 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 FNTAP49354 379 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 SGCGQ13326 291 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 XPO6Q96QU8 1125 aaKnown RBP12.98□□□□□ -0.33
SLX4-201ENST00000294008 CPVLQ9H3G5 476 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 SERHL2Q9H4I8 314 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 KIAA1586Q9HCI6 787 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 SERHLQ9NQF3 203 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 INTS13Q9NVM9 706 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 ARSEP51690 589 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 RNFT2Q96EX2 444 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 TMEM169Q96HH4 297 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 ADCY9O60503 1353 aa12.98□□□□□ -0.33
SLX4-201ENST00000294008 ZBTB39O15060 712 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 STAU1O95793 577 aaKnown RBP12.97□□□□□ -0.33
SLX4-201ENST00000294008 JAK1P23458 1154 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 STAT3P40763 770 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 KCNK10P57789 538 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 IER5Q5VY09 327 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 TAF8Q7Z7C8 310 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 SFR1Q86XK3 245 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 BLOC1S5Q8TDH9 187 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.97□□□□□ -0.33
SLX4-201ENST00000294008 RRN3P2A6NIE6 340 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 MSH4O15457 936 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 PDHA2P29803 388 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 GSPT2Q8IYD1 628 aaKnown RBP12.97□□□□□ -0.33
SLX4-201ENST00000294008 GOLPH3LQ9H4A5 285 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 ZMYND8Q9ULU4 1186 aaPredicted RBP12.97□□□□□ -0.33
SLX4-201ENST00000294008 KLHL20Q9Y2M5 609 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 SMIM22K7EJ46 135 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 POTEIP0CG38 1075 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 NUDT2P50583 147 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 GPC5P78333 572 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 CYP24A1Q07973 514 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 NCAPHQ15003 741 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 ALKBH5Q6P6C2 394 aaKnown RBP12.97□□□□□ -0.33
SLX4-201ENST00000294008 TRPC4APQ8TEL6 797 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 MAN1B1Q9UKM7 699 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 CTSEP14091 401 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 THPOP40225 353 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 SH3RF3Q8TEJ3 882 aaPredicted RBP12.97□□□□□ -0.33
SLX4-201ENST00000294008 HASPINQ8TF76 798 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 SKA1Q96BD8 255 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 FAM96AQ9H5X1 160 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 TNFSF13BQ9Y275 285 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 PRKAB1Q9Y478 270 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 PDZK1P1A8MUH7 402 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 CDC40O60508 579 aaKnown RBP eCLIP12.97□□□□□ -0.33
SLX4-201ENST00000294008 KRT6AP02538 564 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 KRT6BP04259 564 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 CKMP06732 381 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 KRT6CP48668 564 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 VAMP7P51809 220 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 PRAMEF18Q5VWM3 479 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 LCORLQ8N3X6 602 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 MCPH1Q8NEM0 835 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 AK8Q96MA6 479 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 MAGEF1Q9HAY2 307 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 SAE1Q9UBE0 346 aaPredicted RBP12.97□□□□□ -0.33
SLX4-201ENST00000294008 WDR97A6NE52 1622 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 MYL2P10916 166 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 RAD23BP54727 409 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 HMGCS2P54868 508 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 HIC1Q14526 733 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 PDIA6Q15084 440 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 EME1Q96AY2 570 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 SH2D3AQ9BRG2 576 aa12.97□□□□□ -0.33
SLX4-201ENST00000294008 NOP53Q9NZM5 478 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms