RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 HSD17B3P37058 310 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 PSMD7P51665 324 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 VEPH1Q14D04 833 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 HP1BP3Q5SSJ5 553 aaPredicted RBP11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 C3orf20Q8ND61 904 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 GABPB2Q8TAK5 448 aaPredicted RBP11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 SENP6Q9GZR1 1112 aaPredicted RBP11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 CARNS1A5YM72 827 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 NCAPHQ15003 741 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 Q4G0T1 1027 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 SLC30A10Q6XR72 485 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 TMEM143Q96AN5 459 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 HEMGNQ9BXL5 484 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 COL1A1P02452 1464 aaPredicted RBP11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 MAP2K7O14733 419 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 KRT1P04264 644 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 ZCCHC18P0CG32 403 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 KDSRQ06136 332 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 COASYQ13057 564 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 MFSD10Q14728 455 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 PREPLQ4J6C6 727 aaPredicted RBP11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 PDZD4Q76G19 769 aaPredicted RBP11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 ARHGAP22Q7Z5H3 698 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 SIX6OS1Q8N1H7 587 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 DCLK2Q8N568 766 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 ZNF668Q96K58 619 aaPredicted RBP11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 CCSER1Q9C0I3 900 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 UPF3AQ9H1J1 476 aaKnown RBP11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 C17orf75Q9HAS0 396 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 GOLGA8IPA6NC78 632 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 MAGEA13PA6NCF6 341 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 GOLGA8JA6NMD2 632 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 MSH4O15457 936 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 HNRNPCL1O60812 293 aaKnown RBP11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 TADA2AO75478 443 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 CPP00450 1065 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 ACADSP16219 412 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 CIITAP33076 1130 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 BTKQ06187 659 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 LONRF1Q17RB8 773 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 NBPF20Q3BBV1 942 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 KIAA1755Q5JYT7 1200 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 FBXO2Q9UK22 296 aaPredicted RBP11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 SNCAIPQ9Y6H5 919 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 NHSQ6T4R5 1651 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 BTAF1O14981 1849 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 GOLGA8QA0A0J9YX86 632 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 TMEM120BA0PK00 339 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 GOLGA8OA6NCC3 632 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 GOLGA8NF8WBI6 632 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 DCAF4L1Q3SXM0 396 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 PDXDC1Q6P996 788 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 GPD1LQ8N335 351 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 TMEM199Q8N511 208 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 ZNF513Q8N8E2 541 aaPredicted RBP11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 ALG13Q9NP73 1137 aaKnown RBP11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 TTC7AQ9ULT0 858 aaPredicted RBP11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 C15orf41Q9Y2V0 281 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 DUOX1Q9NRD9 1551 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 ASTN2O75129 1339 aaPredicted RBP11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 TLR2O60603 784 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 KRT37O76014 449 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 FSBPO95073 299 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 RPA1P27694 616 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 DHX34Q14147 1143 aaKnown RBP11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 TRIM11Q96F44 468 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 KIF12Q96FN5 646 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 FAM213AQ9BRX8 229 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 AGO2Q9UKV8 859 aaKnown RBP11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 TLL2Q9Y6L7 1015 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 CACNA1FO60840 1977 aa11.96□□□□□ -0.49
NPC1L1-201ENST00000289547 DLG5Q8TDM6 1919 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 PSEN2P49810 448 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 FAM117BQ6P1L5 589 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 RFX6Q8HWS3 928 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 FUKQ8N0W3 1084 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 ISCUQ9H1K1 167 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 UNC45AQ9H3U1 944 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 AGO4Q9HCK5 861 aaKnown RBP11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 CYP26B1Q9NR63 512 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 TBC1D23Q9NUY8 699 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 CDC25CP30307 473 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 NLRP11P59045 1033 aaKnown RBP11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 CAV1Q03135 178 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 TMEM62Q0P6H9 643 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 PCGF5Q86SE9 256 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 TRIM59Q8IWR1 403 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 RNF139Q8WU17 664 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 TRPV6Q9H1D0 765 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 CYP39A1Q9NYL5 469 aa11.96□□□□□ -0.5
NPC1L1-201ENST00000289547 CPB1P15086 417 aa11.95□□□□□ -0.5
NPC1L1-201ENST00000289547 KCNH2Q12809 1159 aa11.95□□□□□ -0.5
NPC1L1-201ENST00000289547 CNGA3Q16281 694 aa11.95□□□□□ -0.5
NPC1L1-201ENST00000289547 NAALADL2Q58DX5 795 aa11.95□□□□□ -0.5
NPC1L1-201ENST00000289547 USP49Q70CQ1 688 aa11.95□□□□□ -0.5
NPC1L1-201ENST00000289547 NPHS2Q9NP85 383 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms