RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 UPF3AQ9H1J1 476 aaKnown RBP10.84□□□□□ -0.67
C9orf43-201ENST00000288462 VIPAS39Q9H9C1 493 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 CYP3A43Q9HB55 503 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 NXF1Q9UBU9 619 aaKnown RBP10.84□□□□□ -0.67
C9orf43-201ENST00000288462 SCINQ9Y6U3 715 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 C17orf102A2RUQ5 167 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 KPNA6O60684 536 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 HSPA6P17066 643 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 EIF4BP23588 611 aaKnown RBP10.83□□□□□ -0.68
C9orf43-201ENST00000288462 AXLP30530 894 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 SSTR3P32745 418 aaPredicted RBP10.83□□□□□ -0.68
C9orf43-201ENST00000288462 SLC1A1P43005 524 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 EPHB4P54760 987 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 GJA9P57773 515 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 NKX3-2P78367 333 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 ZNF211Q13398 564 aaPredicted RBP10.83□□□□□ -0.68
C9orf43-201ENST00000288462 MAMLD1Q13495 774 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 SNX17Q15036 470 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 WDR72Q3MJ13 1102 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 LLGL2Q6P1M3 1020 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 IFT20Q8IY31 132 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 TRIB2Q92519 343 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 TRIM7Q9C029 511 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 DDX47Q9H0S4 455 aaKnown RBP10.83□□□□□ -0.68
C9orf43-201ENST00000288462 SMYD3Q9H7B4 428 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 MRPL47Q9HD33 250 aaKnown RBP10.83□□□□□ -0.68
C9orf43-201ENST00000288462 DPP3Q9NY33 737 aa10.83□□□□□ -0.68
C9orf43-201ENST00000288462 ABT1Q9ULW3 272 aaKnown RBP10.83□□□□□ -0.68
C9orf43-201ENST00000288462 TCRBV5S1A1TA0A578 114 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 MYADML2A6NDP7 307 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 ZSCAN5CA6NGD5 496 aaPredicted RBP10.82□□□□□ -0.68
C9orf43-201ENST00000288462 SART1O43290 800 aaKnown RBP10.82□□□□□ -0.68
C9orf43-201ENST00000288462 CILPO75339 1184 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 PROSCO94903 275 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 CALB1P05937 261 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 P4HA1P13674 534 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 MAN1A1P33908 653 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 GUCY2FP51841 1108 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 RAD23BP54727 409 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 RBP5P82980 135 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 LACTBP83111 547 aaPredicted RBP10.82□□□□□ -0.68
C9orf43-201ENST00000288462 INCA1Q0VD86 236 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 PPP2R5EQ16537 467 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 C2CD6Q53TS8 623 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 EMBQ6PCB8 327 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 EIF1ADQ8N9N8 165 aaKnown RBP10.82□□□□□ -0.68
C9orf43-201ENST00000288462 TMEM35BQ8NCS4 154 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 C1orf131Q8NDD1 294 aaKnown RBP10.82□□□□□ -0.68
C9orf43-201ENST00000288462 WHAMMQ8TF30 809 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 TMEM40Q8WWA1 233 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 CAVIN3Q969G5 261 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 KIF12Q96FN5 646 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 HPDLQ96IR7 371 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 EIF2AQ9BY44 585 aaKnown RBP10.82□□□□□ -0.68
C9orf43-201ENST00000288462 ARHGAP39Q9C0H5 1083 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 GINS2Q9Y248 185 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 THSD7BQ9C0I4 1608 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 SCN1AP35498 2009 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 GOLGA6L10A0A0M3HER8 536 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 GNAT1P11488 350 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 RWDD2BP57060 319 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 ZNF200P98182 395 aaPredicted RBP10.82□□□□□ -0.68
C9orf43-201ENST00000288462 GUCY2DQ02846 1103 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 PAK2Q13177 524 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 NNTQ13423 1086 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 ZBTB6Q15916 424 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 ZNF394Q53GI3 561 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 SEL1L2Q5TEA6 688 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 WDTC1Q8N5D0 677 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 SLC4A11Q8NBS3 891 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 CASKIN2Q8WXE0 1202 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 LHX5Q9H2C1 402 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 EPB41L5Q9HCM4 733 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 PARVAQ9NVD7 372 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.82□□□□□ -0.68
C9orf43-201ENST00000288462 SNTG2Q9NY99 539 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 CNTN3Q9P232 1028 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 HMGXB4Q9UGU5 601 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 GABRQQ9UN88 632 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 AGAP1Q9UPQ3 857 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 NR2E1Q9Y466 385 aa10.82□□□□□ -0.68
C9orf43-201ENST00000288462 DCAF8L1A6NGE4 600 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 TMEM88BA6NKF7 163 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 MYO1FO00160 1098 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 MED7O43513 233 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 ALDH1A1P00352 501 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 PYGMP11217 842 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 PSMC4P43686 418 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 TNNT3P45378 269 aaPredicted RBP10.81□□□□□ -0.68
C9orf43-201ENST00000288462 CRYBB1P53674 252 aaPredicted RBP10.81□□□□□ -0.68
C9orf43-201ENST00000288462 CDH8P55286 799 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 SMC1AQ14683 1233 aaKnown RBP10.81□□□□□ -0.68
C9orf43-201ENST00000288462 PPP1R15BQ5SWA1 713 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 MFSD14CQ5VZR4 134 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 AADACL2Q6P093 401 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 ALKAL1Q6UXT8 129 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 NME8Q8N427 588 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 TTC39CQ8N584 583 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 C7orf31Q8N865 590 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 SMC1BQ8NDV3 1235 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms