RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 AHCYL1O43865 530 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 CDC40O60508 579 aaKnown RBP eCLIP9.49□□□□□ -0.89
SMC2-201ENST00000286398 H2AFXP16104 143 aaPredicted RBP9.49□□□□□ -0.89
SMC2-201ENST00000286398 KCNA6P17658 529 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 JAK3P52333 1124 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 NR1I3Q14994 352 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 C11orf88Q6PI97 169 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 KLHL17Q6TDP4 642 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 STKLD1Q8NE28 680 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 C19orf18Q8NEA5 215 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 ASAP3Q8TDY4 903 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 ELMO2Q96JJ3 720 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 DCUN1D5Q9BTE7 237 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 PABPC3Q9H361 631 aaKnown RBP9.49□□□□□ -0.89
SMC2-201ENST00000286398 L2HGDHQ9H9P8 463 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 SELENONQ9NZV5 590 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 PCDHA6Q9UN73 950 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 L1RE1Q9UN81 338 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 PCDHA8Q9Y5H6 950 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 PDZK1P1A8MUH7 402 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 SMNDC1O75940 238 aaKnown RBP eCLIP9.49□□□□□ -0.89
SMC2-201ENST00000286398 MOCS2O96007 188 aaPredicted RBP9.49□□□□□ -0.89
SMC2-201ENST00000286398 THRAP10827 490 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 ZNF235Q14590 738 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 TTC39BQ5VTQ0 682 aaPredicted RBP9.49□□□□□ -0.89
SMC2-201ENST00000286398 KDELC2Q7Z4H8 507 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 TNIP2Q8NFZ5 429 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 UBASH3BQ8TF42 649 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 EFCAB1Q9HAE3 211 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 CLRN2A0PK11 232 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 O00370 1275 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 ZNF862O60290 1169 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 GPC3P51654 580 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 DCAF4L1Q3SXM0 396 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 ZBTB49Q6ZSB9 765 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 SLC30A5Q8TAD4 765 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 FAM111AQ96PZ2 611 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 LEMD3Q9Y2U8 911 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 PCDHGA3Q9Y5H0 932 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 TRIM49D1C9J1S8 452 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 EIF2S1P05198 315 aaKnown RBP9.49□□□□□ -0.89
SMC2-201ENST00000286398 HIST1H2AGP0C0S8 130 aaPredicted RBP9.49□□□□□ -0.89
SMC2-201ENST00000286398 TFE3P19532 575 aaPredicted RBP9.49□□□□□ -0.89
SMC2-201ENST00000286398 HIST1H2ADP20671 130 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 SSTR3P32745 418 aaPredicted RBP9.49□□□□□ -0.89
SMC2-201ENST00000286398 STAT3P40763 770 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 CCNA1P78396 465 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 CHRNB3Q05901 458 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 NAB2Q15742 525 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 KBTBD12Q3ZCT8 623 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 KRT77Q7Z794 578 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 TAF8Q7Z7C8 310 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 HIST1H2AHQ96KK5 128 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 TRAPPC9Q96Q05 1148 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 HIST1H2AJQ99878 128 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 H2AFJQ9BTM1 129 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 FAM49AQ9H0Q0 323 aaPredicted RBP9.49□□□□□ -0.89
SMC2-201ENST00000286398 RIC8BQ9NVN3 520 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 CACNA2D2Q9NY47 1150 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 YEATS2Q9ULM3 1422 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 MYOM2P54296 1465 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 PTPRTO14522 1441 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 F8VZ95 297 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 TNFRSF21O75509 655 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 FAM58BPP0C7Q3 252 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 CALB2P22676 271 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 CDK8P49336 464 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 NT5C2P49902 561 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 HSD17B4P51659 736 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 ATP12AP54707 1039 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 C21orf59P57076 290 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 NFX1Q12986 1120 aaKnown RBP9.49□□□□□ -0.89
SMC2-201ENST00000286398 MROH9Q5TGP6 573 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 WDR93Q6P2C0 686 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 BNC2Q6ZN30 1099 aaPredicted RBP9.49□□□□□ -0.89
SMC2-201ENST00000286398 ANKS3Q6ZW76 656 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 ANKS1AQ92625 1134 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 HES6Q96HZ4 224 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 DEPDC7Q96QD5 511 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 THUMPD3Q9BV44 507 aaKnown RBP9.49□□□□□ -0.89
SMC2-201ENST00000286398 STK33Q9BYT3 514 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 PIH1D3Q9NQM4 214 aaKnown RBP9.49□□□□□ -0.89
SMC2-201ENST00000286398 CDHR2Q9BYE9 1310 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 RGS20O76081 388 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 TNFAIP2Q03169 654 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 FAM160B2Q86V87 743 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 TTC39CQ8N584 583 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 TMEM117Q9H0C3 514 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 C15orf41Q9Y2V0 281 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 ITGAXP20702 1163 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 ORC2Q13416 577 aaPredicted RBP9.48□□□□□ -0.89
SMC2-201ENST00000286398 MTFR1Q15390 333 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 PPP2R3CQ969Q6 453 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 C18orf8Q96DM3 657 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 ILKAPQ9H0C8 392 aaPredicted RBP9.48□□□□□ -0.89
SMC2-201ENST00000286398 VPS33BQ9H267 617 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 COPG2Q9UBF2 871 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 XDHP47989 1333 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 TRPC5OSA6NMA1 111 aa9.48□□□□□ -0.89
SMC2-201ENST00000286398 BAIAP3O94812 1187 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms