RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 FAM13CQ8NE31 585 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 CLEC4DQ8WXI8 215 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 CCDC77Q9BR77 488 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 TDRD3Q9H7E2 651 aaKnown RBP10.99□□□□□ -0.65
SKA1-201ENST00000285116 MLXIPLQ9NP71 852 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 ANAPC5Q9UJX4 755 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 PCDHB2Q9Y5E7 798 aa10.99□□□□□ -0.65
SKA1-201ENST00000285116 UPP2O95045 317 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 KCNA3P22001 575 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 KLRC2P26717 231 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 PTPN7P35236 360 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 TUBP50607 506 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 RASSF2P50749 326 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 YARSP54577 528 aaKnown RBP10.98□□□□□ -0.65
SKA1-201ENST00000285116 MON1BQ7L1V2 547 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 ANKS1BQ7Z6G8 1248 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 CPNE8Q86YQ8 564 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 CBWD2Q8IUF1 395 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 BTBD6Q96KE9 485 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 TTC25Q96NG3 672 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 PITPNM3Q9BZ71 974 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 MYLK2Q9H1R3 596 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 SENP1Q9P0U3 644 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 WDR35Q9P2L0 1181 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 FETUBQ9UGM5 382 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 ASIC3Q9UHC3 531 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 ANAPC7Q9UJX3 599 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 CNTN6Q9UQ52 1028 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 STARD13Q9Y3M8 1113 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 C2CD2Q9Y426 696 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 CNTNAP1P78357 1384 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 IRF6O14896 467 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 HGSO14964 777 aaPredicted RBP10.98□□□□□ -0.65
SKA1-201ENST00000285116 GH1P01241 217 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 SP100P23497 879 aaPredicted RBP10.98□□□□□ -0.65
SKA1-201ENST00000285116 SPP2Q13103 211 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 MPP2Q14168 576 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 ZC3H12AQ5D1E8 599 aaKnown RBP10.98□□□□□ -0.65
SKA1-201ENST00000285116 IRGCQ6NXR0 463 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 XRRA1Q6P2D8 792 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 ANKRD35Q8N283 1001 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 DRAXINQ8NBI3 349 aaPredicted RBP10.98□□□□□ -0.65
SKA1-201ENST00000285116 RBBP8NLQ8NC74 664 aaPredicted RBP10.98□□□□□ -0.65
SKA1-201ENST00000285116 ZSWIM2Q8NEG5 633 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 EXD1Q8NHP7 514 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 MAML1Q92585 1016 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 KIAA1586Q9HCI6 787 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 SSU72Q9NP77 194 aaKnown RBP10.98□□□□□ -0.65
SKA1-201ENST00000285116 CHST7Q9NS84 486 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 USH1CQ9Y6N9 552 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 LOC285556D6RIA3 1793 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 TCP10L2B9ZVM9 353 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 THAP12O43422 761 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 ACSL3O95573 720 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 TAC1P20366 129 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 CAP2P40123 477 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 PTDSS1P48651 473 aaKnown RBP10.98□□□□□ -0.65
SKA1-201ENST00000285116 KRT76Q01546 638 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 SAMD7Q7Z3H4 446 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 C1orf54Q8WWF1 131 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 ITFG2Q969R8 447 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 ERP27Q96DN0 273 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 PRMT6Q96LA8 375 aaPredicted RBP10.98□□□□□ -0.65
SKA1-201ENST00000285116 FAM210AQ96ND0 272 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 COL20A1Q9P218 1284 aa10.98□□□□□ -0.65
SKA1-201ENST00000285116 FER1L6Q2WGJ9 1857 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 YDJCA8MPS7 323 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 H0YCG3 227 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 SLC16A4O15374 487 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 DCTN3O75935 186 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 GM2AP17900 193 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 UBXN2AP68543 259 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 IL9RQ01113 521 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 BRDTQ58F21 947 aaPredicted RBP10.97□□□□□ -0.65
SKA1-201ENST00000285116 TMEM63BQ5T3F8 832 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 SLC39A4Q6P5W5 647 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 PHF13Q86YI8 300 aaPredicted RBP10.97□□□□□ -0.65
SKA1-201ENST00000285116 RHOT1Q8IXI2 618 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 TTLL6Q8N841 843 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 FLAD1Q8NFF5 587 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 TAS1R2Q8TE23 839 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 DENND1AQ8TEH3 1009 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 TRAPPC9Q96Q05 1148 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 LRRC37BQ96QE4 947 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 POP1Q99575 1024 aaKnown RBP10.97□□□□□ -0.65
SKA1-201ENST00000285116 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.97□□□□□ -0.65
SKA1-201ENST00000285116 TMOD2Q9NZR1 351 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 SPDYE2BA6NHP3 402 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 WDR64B1ANS9 1081 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 GSTA2P09210 222 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 SPDYE6P0CI01 402 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 NPTX2P47972 431 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 PEX3P56589 373 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 MRPS9P82933 396 aaKnown RBP10.97□□□□□ -0.65
SKA1-201ENST00000285116 MUM1Q2TAK8 710 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 PPP1R15BQ5SWA1 713 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 PLEKHA7Q6IQ23 1121 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 SV2AQ7L0J3 742 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 LONP2Q86WA8 852 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 SUPT20HQ8NEM7 779 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms