RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 ALG1Q9BT22 464 aa11.16□□□□□ -0.62
ERGIC3-201ENST00000279052 S100A14Q9HCY8 104 aa11.16□□□□□ -0.62
ERGIC3-201ENST00000279052 PI4KBQ9UBF8 816 aa11.16□□□□□ -0.62
ERGIC3-201ENST00000279052 HPS5Q9UPZ3 1129 aa11.16□□□□□ -0.62
ERGIC3-201ENST00000279052 ATP11BQ9Y2G3 1177 aa11.16□□□□□ -0.62
ERGIC3-201ENST00000279052 UBR1Q8IWV7 1749 aa11.16□□□□□ -0.62
ERGIC3-201ENST00000279052 FMN2Q9NZ56 1722 aa11.16□□□□□ -0.62
ERGIC3-201ENST00000279052 ATMINO43313 823 aaPredicted RBP11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 GMNNO75496 209 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 ALOX5P09917 674 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 UQCRBP14927 111 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 PKLRP30613 574 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 FMR1Q06787 632 aaKnown RBP eCLIP11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 WDR44Q5JSH3 913 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 FAM26DQ5JW98 314 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 TTC39BQ5VTQ0 682 aaPredicted RBP11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 BLOC1S2Q6QNY1 142 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 ZNF410Q86VK4 478 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 ECHDC2Q86YB7 292 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 KIAA2013Q8IYS2 634 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 DACT3Q96B18 629 aaPredicted RBP11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 CHP1Q99653 195 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 NAP1L4Q99733 375 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 PAIP1Q9H074 479 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 GGA3Q9NZ52 723 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 RSL24D1Q9UHA3 163 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 ASIC3Q9UHC3 531 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 PXDNLA1KZ92 1463 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 MAP3K15Q6ZN16 1313 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 ILVBLA1L0T0 632 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 KRBA1A5PL33 1030 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 SLC22A1O15245 554 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 SULT1C4O75897 302 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 CDH2P19022 906 aaPredicted RBP11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 CYLC1P35663 651 aaPredicted RBP11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 BPIFB3P59826 476 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 MGAT5Q09328 741 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 FCHO2Q0JRZ9 810 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 TCIRG1Q13488 830 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 RFWD3Q6PCD5 774 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 ADAMTSL2Q86TH1 951 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 METTL25Q8N6Q8 603 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 PSD4Q8NDX1 1056 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 SHCBP1Q8NEM2 672 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 REXO5Q96IC2 774 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 TM9SF2Q99805 663 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 CLPBQ9H078 707 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 DDX47Q9H0S4 455 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 ADNPQ9H2P0 1102 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 UBA2Q9UBT2 640 aaPredicted RBP11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 DNAJB4Q9UDY4 337 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 SPG7Q9UQ90 795 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 STARD13Q9Y3M8 1113 aa11.15□□□□□ -0.62
ERGIC3-201ENST00000279052 MYH1P12882 1939 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 A8MXQ7 604 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 PSMD11O00231 422 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 NCAM2O15394 837 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 DDX58O95786 925 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 SNRPAP09012 282 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 CDC27P30260 824 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 MRPS15P82914 257 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 CDR2Q01850 454 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 FOLH1Q04609 750 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 KRT81Q14533 505 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 FCRLBQ6BAA4 426 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 PI4K2BQ8TCG2 481 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 CFAP57Q96MR6 1250 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 PFDN2Q9UHV9 154 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 ARHGAP26Q9UNA1 814 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 MYH8P13535 1937 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 MIF4GDA9UHW6 222 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 TRIM77I1YAP6 450 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 HOXA2O43364 376 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 RETP07949 1114 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 SLC9A3P48764 834 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 PDK3Q15120 406 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 RNASEH2BQ5TBB1 312 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 ZNF658Q5TYW1 1059 aaPredicted RBP11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 RNF19BQ6ZMZ0 732 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 CYB5R4Q7L1T6 521 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 SCYL3Q8IZE3 742 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 TERB1Q8NA31 727 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 SPATA5Q8NB90 893 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 OR6Y1Q8NGX8 325 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 U2AF1L4Q8WU68 220 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 TAMM41Q96BW9 452 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 LLPHQ9BRT6 129 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 CUEDC2Q9H467 287 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 OLFML3Q9NRN5 406 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 SMARCAL1Q9NZC9 954 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 TBX22Q9Y458 520 aa11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 XRN1Q8IZH2 1706 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-201ENST00000279052 FAM208AQ9UK61 1670 aaKnown RBP11.13□□□□□ -0.63
ERGIC3-201ENST00000279052 XPO1O14980 1071 aaKnown RBP11.13□□□□□ -0.63
ERGIC3-201ENST00000279052 SEMA3EO15041 775 aa11.13□□□□□ -0.63
ERGIC3-201ENST00000279052 AGTP01019 485 aa11.13□□□□□ -0.63
ERGIC3-201ENST00000279052 NUDT1P36639 197 aa11.13□□□□□ -0.63
ERGIC3-201ENST00000279052 ARL1P40616 181 aaPredicted RBP11.13□□□□□ -0.63
ERGIC3-201ENST00000279052 GPD2P43304 727 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms