RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 CLIC4Q9Y696 253 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 A0A1B0GTH6 734 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 MACROD2A1Z1Q3 448 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 LRRC10BA6NIK2 292 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 TRIM64CA6NLI5 447 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 BTBD18B2RXH4 712 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 ERVV-2B6SEH9 535 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 DKC1O60832 514 aaKnown RBP eCLIP3.14□□□□□ -1.91
HERC4-201ENST00000277817 PTP4A3O75365 173 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 BAG2O95816 211 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 TUBB4AP04350 444 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 AMY2AP04746 511 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 PFKFB1P16118 471 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 AMY2BP19961 511 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 PEX19P40855 299 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 EVCP57679 992 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 ST5P78524 1137 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 TBC1D8BQ0IIM8 1120 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 HYAL2Q12891 473 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 AKNAD1Q5T1N1 836 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 HHIPL2Q6UWX4 724 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 UBE2R2Q712K3 238 aaPredicted RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 ENOSF1Q7L5Y1 443 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 ZNF804AQ7Z570 1209 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 MYLK4Q86YV6 388 aaPredicted RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 IL31RAQ8NI17 732 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 BAHD1Q8TBE0 780 aaPredicted RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 SDR42E1Q8WUS8 393 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 BTN2A2Q8WVV5 523 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 RSAD2Q8WXG1 361 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 MAP3K14Q99558 947 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CARD6Q9BX69 1037 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 NYXQ9GZU5 481 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 BLZF1Q9H2G9 400 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 NOL6Q9H6R4 1146 aaKnown RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 GREM2Q9H772 168 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 SERINC1Q9NRX5 453 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 GPR27Q9NS67 375 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 OGFRQ9NZT2 677 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 TMCC3Q9ULS5 477 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 PYCARDQ9ULZ3 195 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CTNND2Q9UQB3 1225 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 ST14Q9Y5Y6 855 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 SPEF2Q9C093 1822 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 LCHNA4D1U4 455 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CLCA1A8K7I4 914 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 FSCN2O14926 492 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 DHHO43323 396 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 KRT86O43790 486 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 PDE6AP16499 860 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 GNA11P29992 359 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 TXKP42681 527 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 GYG1P46976 350 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 ALDH6A1Q02252 535 aaKnown RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 AGERQ15109 404 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 NECTIN1Q15223 517 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 GNPTABQ3T906 1256 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CCDC122Q5T0U0 273 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 KCNT2Q6UVM3 1135 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 GALNT15Q8N3T1 639 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CARNMT1Q8N4J0 409 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CEP112Q8N8E3 955 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 MLKLQ8NB16 471 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 EHBP1Q8NDI1 1231 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 FBXO18Q8NFZ0 1043 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 TSPEARQ8WU66 669 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 DYDC1Q8WWB3 177 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 ERO1AQ96HE7 468 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CDC6Q99741 560 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 AP1M1Q9BXS5 423 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 ANKRD2Q9GZV1 360 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 VPS11Q9H270 941 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 FAM204AQ9H8W3 233 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 JMJD4Q9H9V9 463 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 RBM28Q9NW13 759 aaKnown RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 WDR35Q9P2L0 1181 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CDC23Q9UJX2 597 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 GSTTP1A0A1W2PQM5 241 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 PABPN1LA6NDY0 278 aaKnown RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 IPO5O00410 1097 aaKnown RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 DOK2O60496 412 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 CCNT1O60563 726 aaKnown RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 TBCAO75347 108 aaKnown RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 TACC1O75410 805 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 CSF1P09603 554 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 ATP1A3P13637 1013 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 TBXAS1P24557 533 aaPredicted RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 PEX2P28328 305 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 PHKA1P46020 1223 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 STARD6P59095 220 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 MRPS9P82933 396 aaKnown RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 TFAP4Q01664 338 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 PPP2R3AQ06190 1150 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 CETN1Q12798 172 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 UBE3CQ15386 1083 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 EZH2Q15910 746 aaKnown RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 ZACNQ401N2 412 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 SV2CQ496J9 727 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 PARP10Q53GL7 1025 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 DNAJC21Q5F1R6 531 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms