RNA–Protein interactions for RNA: ENST00000277480.6

LCN2-201, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LCN2, Length 822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-201ENST00000277480 ORC1Q13415 861 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 PPIGQ13427 754 aaKnown RBP eCLIP10.84□□□□□ -0.67
LCN2-201ENST00000277480 SOWAHAQ2M3V2 549 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 TSR1Q2NL82 804 aaKnown RBP10.84□□□□□ -0.67
LCN2-201ENST00000277480 SV2CQ496J9 727 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 PAN2Q504Q3 1202 aaKnown RBP10.84□□□□□ -0.67
LCN2-201ENST00000277480 TDRD12Q587J7 1177 aaKnown RBP10.84□□□□□ -0.67
LCN2-201ENST00000277480 TMEM240Q5SV17 173 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 TMEM270Q6UE05 265 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 ZNF365Q70YC5 407 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 OTOP2Q7RTS6 562 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 NOP9Q86U38 636 aaKnown RBP10.84□□□□□ -0.67
LCN2-201ENST00000277480 RBBP8NLQ8NC74 664 aaPredicted RBP10.84□□□□□ -0.67
LCN2-201ENST00000277480 ACRBPQ8NEB7 543 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 LNX1Q8TBB1 728 aaPredicted RBP10.84□□□□□ -0.67
LCN2-201ENST00000277480 EPS8L1Q8TE68 723 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 KBTBD7Q8WVZ9 684 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 ATRIPQ8WXE1 791 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 DDX1Q92499 740 aaKnown RBP10.84□□□□□ -0.67
LCN2-201ENST00000277480 FAXDC2Q96IV6 333 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 ZNF560Q96MR9 790 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 ZSWIM1Q9BR11 485 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 DESI2Q9BSY9 194 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 ELOVL4Q9GZR5 314 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 CYP3A43Q9HB55 503 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 SPTLC3Q9NUV7 552 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 ZNHIT6Q9NWK9 470 aaKnown RBP10.84□□□□□ -0.67
LCN2-201ENST00000277480 PRKAG2Q9UGJ0 569 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 NENFQ9UMX5 172 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 TRIP11Q15643 1979 aa10.84□□□□□ -0.67
LCN2-201ENST00000277480 SSU72P8A0A1W2PR75 194 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 DDX3XO00571 662 aaKnown RBP eCLIP10.83□□□□□ -0.68
LCN2-201ENST00000277480 HOXA2O43364 376 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 CILPO75339 1184 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 BAIAP3O94812 1187 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 KIF4AO95239 1232 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 NDUFA10O95299 355 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 AMHP03971 560 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 CFHP08603 1231 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 CYP11B1P15538 503 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 PNPLA4P41247 253 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 BRCC3P46736 316 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 SLC11A1P49279 550 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 KIF11P52732 1056 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 RAD23BP54727 409 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 INCA1Q0VD86 236 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 TIGD5Q53EQ6 642 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 ZNF394Q53GI3 561 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 TAF3Q5VWG9 929 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 FAM117BQ6P1L5 589 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 PALB2Q86YC2 1186 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 ABI1Q8IZP0 508 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 PDCL2Q8N4E4 241 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 KIAA1524Q8TCG1 905 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 HASPINQ8TF76 798 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 ZNF689Q96CS4 500 aaPredicted RBP10.83□□□□□ -0.68
LCN2-201ENST00000277480 DDX27Q96GQ7 796 aaKnown RBP10.83□□□□□ -0.68
LCN2-201ENST00000277480 SENP8Q96LD8 212 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 UROC1Q96N76 676 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 MMS19Q96T76 1030 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 PCDHB18PQ96TA0 734 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.83□□□□□ -0.68
LCN2-201ENST00000277480 HTATIP2Q9BUP3 242 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 CWH43Q9H720 699 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 MARCH5Q9NX47 278 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 CXXC1Q9P0U4 656 aaPredicted RBP10.83□□□□□ -0.68
LCN2-201ENST00000277480 KANSL3Q9P2N6 904 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 R3HCC1Q9Y3T6 440 aaKnown RBP10.83□□□□□ -0.68
LCN2-201ENST00000277480 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.83□□□□□ -0.68
LCN2-201ENST00000277480 EPN1Q9Y6I3 576 aaPredicted RBP10.83□□□□□ -0.68
LCN2-201ENST00000277480 MICAL3Q7RTP6 2002 aa10.83□□□□□ -0.68
LCN2-201ENST00000277480 TTC3P53804 2025 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 A0A087X0T9 212 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 USP27XA6NNY8 438 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 CYB561D2O14569 222 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 NRP1O14786 923 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 TACC1O75410 805 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 FGBP02675 491 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 MMEP08473 750 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 FAM228BP0C875 321 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 P4HA1P13674 534 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 SSTR3P32745 418 aaPredicted RBP10.82□□□□□ -0.68
LCN2-201ENST00000277480 PBX3P40426 434 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 OR1G1P47890 313 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 KCNJ6P48051 423 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 NDST1P52848 882 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 FMO1Q01740 532 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 GFPT1Q06210 699 aaPredicted RBP10.82□□□□□ -0.68
LCN2-201ENST00000277480 WSCD1Q658N2 575 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 DCLRE1AQ6PJP8 1040 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 DNAAF5Q86Y56 855 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 CCDC170Q8IYT3 715 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 TOP6BLQ8N6T0 577 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 SLC4A11Q8NBS3 891 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 SLC30A5Q8TAD4 765 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 BCL7CQ8WUZ0 217 aaPredicted RBP10.82□□□□□ -0.68
LCN2-201ENST00000277480 TFAP2BQ92481 460 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 AGPAT1Q99943 283 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 LPIN3Q9BQK8 851 aa10.82□□□□□ -0.68
LCN2-201ENST00000277480 DPEP3Q9H4B8 488 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms