RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ANKZF1Q9H8Y5 726 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 KLK14Q9P0G3 267 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 RNF14Q9UBS8 474 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 PARP2Q9UGN5 583 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 IPPQ9Y573 584 aa12.33□□□□□ -0.44
SCAF11-201ENST00000266589 FRMPD3Q5JV73 1810 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 TMEM110-MUSTN1A8MSY1 372 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 CES2O00748 559 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 RPS6KA5O75582 802 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 STAU1O95793 577 aaKnown RBP12.32□□□□□ -0.44
SCAF11-201ENST00000266589 CHRNA1P02708 482 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 INHAP05111 366 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 MYBL1P10243 752 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 H2AFXP16104 143 aaPredicted RBP12.32□□□□□ -0.44
SCAF11-201ENST00000266589 MYO1EQ12965 1108 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 MESDQ14696 234 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 ZBTB6Q15916 424 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 C2CD6Q53TS8 623 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 RPAINQ86UA6 219 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 SPATA4Q8NEY3 305 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 TFAP2BQ92481 460 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 C11orf70Q9BRQ4 267 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 CYP3A43Q9HB55 503 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 RNF19AQ9NV58 838 aa12.32□□□□□ -0.44
SCAF11-201ENST00000266589 RNF216Q9NWF9 866 aaPredicted RBP12.32□□□□□ -0.44
SCAF11-201ENST00000266589 FKTNO75072 461 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 CD19P15391 556 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 RRM1P23921 792 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 THPOP40225 353 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 ACLYP53396 1101 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 RAD23BP54727 409 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 ITIH3Q06033 890 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 MGAT3Q09327 533 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 NFX1Q12986 1120 aaKnown RBP12.31□□□□□ -0.44
SCAF11-201ENST00000266589 ORC1Q13415 861 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 ITGA7Q13683 1181 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 PPP1R2P3Q6NXS1 205 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 PHF13Q86YI8 300 aaPredicted RBP12.31□□□□□ -0.44
SCAF11-201ENST00000266589 SMG8Q8ND04 991 aaKnown RBP12.31□□□□□ -0.44
SCAF11-201ENST00000266589 ZNF296Q8WUU4 475 aaPredicted RBP12.31□□□□□ -0.44
SCAF11-201ENST00000266589 PBKQ96KB5 322 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 BTBD6Q96KE9 485 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 PARD6BQ9BYG5 372 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 AVENQ9NQS1 362 aaPredicted RBP12.31□□□□□ -0.44
SCAF11-201ENST00000266589 ADAM22Q9P0K1 906 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 HMGXB4Q9UGU5 601 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 UBQLN1Q9UMX0 589 aaKnown RBP12.31□□□□□ -0.44
SCAF11-201ENST00000266589 ST3GAL5Q9UNP4 418 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 ALG6Q9Y672 507 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 HTTP42858 3142 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 SCN1AP35498 2009 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 SMIM28A0A1B0GU29 152 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 PPEF2O14830 753 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 TLR3O15455 904 aaKnown RBP12.31□□□□□ -0.44
SCAF11-201ENST00000266589 CILPO75339 1184 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 LSM8O95777 96 aaKnown RBP12.31□□□□□ -0.44
SCAF11-201ENST00000266589 PAEPP09466 180 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 YY1P25490 414 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 RNASE9P60153 205 aaKnown RBP12.31□□□□□ -0.44
SCAF11-201ENST00000266589 LLGL2Q6P1M3 1020 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 MMS22LQ6ZRQ5 1243 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 PHLDB2Q86SQ0 1253 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 SLC4A11Q8NBS3 891 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 MSANTD4Q8NCY6 345 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 SLAIN1Q8ND83 568 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 C1orf131Q8NDD1 294 aaKnown RBP12.31□□□□□ -0.44
SCAF11-201ENST00000266589 WHAMMQ8TF30 809 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 TWNKQ96RR1 684 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 SELENOOQ9BVL4 669 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 ELOVL4Q9GZR5 314 aa12.31□□□□□ -0.44
SCAF11-201ENST00000266589 ARGLU1Q9NWB6 273 aaPredicted RBP12.31□□□□□ -0.44
SCAF11-201ENST00000266589 DDX3YO15523 660 aaKnown RBP12.3□□□□□ -0.44
SCAF11-201ENST00000266589 MED7O43513 233 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 CEP104O60308 925 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 CABYRO75952 493 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 COMTP21964 271 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
SCAF11-201ENST00000266589 XKR4Q5GH76 650 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 LIN9Q5TKA1 542 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 TMEM35BQ8NCS4 154 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 ARRDC4Q8NCT1 418 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 TMEM176AQ96HP8 235 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 VCPIP1Q96JH7 1222 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 PNKPQ96T60 521 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 ANAPC7Q9UJX3 599 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 PCDHGC3Q9UN70 934 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 NOD1Q9Y239 953 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 CEP83Q9Y592 693 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 DNAH12Q6ZR08 3092 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 XPOTO43592 962 aaKnown RBP12.3□□□□□ -0.44
SCAF11-201ENST00000266589 KCNE1P15382 129 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 CLCN6P51797 869 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 PTPN11Q06124 597 aaPredicted RBP12.3□□□□□ -0.44
SCAF11-201ENST00000266589 INCA1Q0VD86 236 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 PTP4A2Q12974 167 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 ARHGEF6Q15052 776 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 C9orf57Q5W0N0 161 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 MMGT1Q8N4V1 131 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 LRRC52Q8N7C0 313 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 GLT1D1Q96MS3 346 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms