RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 CEP72Q9P209 647 aa13.46□□□□□ -0.26
PRPF6-201ENST00000266079 DAPK3O43293 454 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 CEP104O60308 925 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 KIF4AO95239 1232 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 ADSSP30520 456 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 BMT2Q1RMZ1 405 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 AP1ARQ63HQ0 302 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 SLC39A4Q6P5W5 647 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 GLT1D1Q96MS3 346 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 NTPCRQ9BSD7 190 aaKnown RBP13.45□□□□□ -0.26
PRPF6-201ENST00000266079 C17orf75Q9HAS0 396 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.45□□□□□ -0.269e-7■■■■■ 127.1
PRPF6-201ENST00000266079 PEX19P40855 299 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 EIF3BP55884 814 aaKnown RBP13.45□□□□□ -0.26
PRPF6-201ENST00000266079 DHX9Q08211 1270 aaKnown RBP13.45□□□□□ -0.26
PRPF6-201ENST00000266079 ITGA7Q13683 1181 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 CCSAPQ6IQ19 270 aaPredicted RBP13.45□□□□□ -0.26
PRPF6-201ENST00000266079 TRPM8Q7Z2W7 1104 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 MAP4K3Q8IVH8 894 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 ZBTB8OSQ8IWT0 167 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 PCSK9Q8NBP7 692 aaKnown RBP13.45□□□□□ -0.26
PRPF6-201ENST00000266079 CPB2Q96IY4 423 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 DDX47Q9H0S4 455 aaKnown RBP13.45□□□□□ -0.26
PRPF6-201ENST00000266079 IFT122Q9HBG6 1241 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 LRRC4CQ9HCJ2 640 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 RRN3P2A6NIE6 340 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 CCDC188H7C350 402 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 PRKCBP05771 671 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 CHN1P15882 459 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 AP1M1Q9BXS5 423 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 PACSIN1Q9BY11 444 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 TMEM206Q9H813 350 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 CORO1CQ9ULV4 474 aaPredicted RBP13.45□□□□□ -0.26
PRPF6-201ENST00000266079 TRAF3IP3Q9Y228 551 aa13.45□□□□□ -0.26
PRPF6-201ENST00000266079 A0A087X0T9 212 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 PGRMC1O00264 195 aaKnown RBP13.44□□□□□ -0.26
PRPF6-201ENST00000266079 DIAPH2O60879 1101 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 MMEP08473 750 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 FAM228BP0C875 321 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 NQO1P15559 274 aaKnown RBP13.44□□□□□ -0.26
PRPF6-201ENST00000266079 ACOT2P49753 483 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 MAPK6Q16659 721 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 CTU1Q7Z7A3 348 aaKnown RBP13.44□□□□□ -0.26
PRPF6-201ENST00000266079 LRRC34Q8IZ02 419 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 CCDC127Q96BQ5 260 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 TRPV6Q9H1D0 765 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 STARD7Q9NQZ5 370 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 HSPBP1Q9NZL4 362 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 SAMD15Q9P1V8 674 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 GTF2IRD1Q9UHL9 959 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 RANBP2P49792 3224 aaKnown RBP13.44□□□□□ -0.26
PRPF6-201ENST00000266079 LIN7AO14910 233 aaPredicted RBP13.44□□□□□ -0.26
PRPF6-201ENST00000266079 CAND2O75155 1236 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 TRIM49P0CI25 452 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 TRIM49CP0CI26 452 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 GPC3P51654 580 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 RTP1P59025 263 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 TFDP1Q14186 410 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 FAM133BQ5BKY9 247 aaKnown RBP13.44□□□□□ -0.26
PRPF6-201ENST00000266079 ZBTB41Q5SVQ8 909 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 CBWD2Q8IUF1 395 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 MICAL1Q8TDZ2 1067 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 AGAP1Q9UPQ3 857 aa13.44□□□□□ -0.26
PRPF6-201ENST00000266079 A0A1W2PQ45 241 aaPredicted RBP13.43□□□□□ -0.26
PRPF6-201ENST00000266079 A0A1W2PQY0 241 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 BTNL10A8MVZ5 291 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 NOL4O94818 638 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 CCND1P24385 295 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 SPDYCQ5MJ68 293 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 HOOK3Q86VS8 718 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 TMEM40Q8WWA1 233 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 ATXN2LQ8WWM7 1075 aaKnown RBP13.43□□□□□ -0.26
PRPF6-201ENST00000266079 SEC14L1Q92503 715 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 ELAC2Q9BQ52 826 aaKnown RBP13.43□□□□□ -0.26
PRPF6-201ENST00000266079 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.43□□□□□ -0.261e-11■□□□□ 10.2
PRPF6-201ENST00000266079 FAM213AQ9BRX8 229 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.43□□□□□ -0.26
PRPF6-201ENST00000266079 SLITRK6Q9H5Y7 841 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 FAM114A2Q9NRY5 505 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 COL1A2P08123 1366 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 KBTBD13C9JR72 458 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 GAS2O43903 313 aaKnown RBP13.43□□□□□ -0.26
PRPF6-201ENST00000266079 MSCO60682 206 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 RPL13P26373 211 aaKnown RBP13.43□□□□□ -0.26
PRPF6-201ENST00000266079 MMP13P45452 471 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 LMBRD2Q68DH5 695 aaPredicted RBP13.43□□□□□ -0.26
PRPF6-201ENST00000266079 EXOC8Q8IYI6 725 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 FAM186BQ8IYM0 893 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 LINC01465Q8N7H1 131 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 HAPLN2Q9GZV7 340 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 AMACRQ9UHK6 382 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 EXOC7Q9UPT5 735 aa13.43□□□□□ -0.26
PRPF6-201ENST00000266079 NOC2LQ9Y3T9 749 aaKnown RBP13.43□□□□□ -0.26
PRPF6-201ENST00000266079 KRIT1O00522 736 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 PPFIA2O75334 1257 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 PHKA2P46019 1235 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 PTENP60484 403 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 KCNJ2P63252 427 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 ADAM17P78536 824 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 EDRF1Q3B7T1 1238 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms