RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TMC2Q8TDI7 906 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 TAS1R2Q8TE23 839 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 GRAMD1AQ96CP6 724 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 RMDN1Q96DB5 314 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 SPATS2LQ9NUQ6 558 aaKnown RBP14.69□□□□□ -0.06
CDH3-201ENST00000264012 ARHGAP20Q9P2F6 1191 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 UBQLN1Q9UMX0 589 aaKnown RBP14.69□□□□□ -0.06
CDH3-201ENST00000264012 CYP11B1P15538 503 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 TAF6P49848 677 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 PGM5Q15124 567 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 POP1Q99575 1024 aaKnown RBP14.69□□□□□ -0.06
CDH3-201ENST00000264012 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.69□□□□□ -0.06
CDH3-201ENST00000264012 SMG5Q9UPR3 1016 aaKnown RBP14.69□□□□□ -0.06
CDH3-201ENST00000264012 UBA6A0AVT1 1052 aaPredicted RBP14.68□□□□□ -0.06
CDH3-201ENST00000264012 EEF2KO00418 725 aaKnown RBP14.68□□□□□ -0.06
CDH3-201ENST00000264012 COILP38432 576 aaPredicted RBP14.68□□□□□ -0.06
CDH3-201ENST00000264012 GRIK5Q16478 980 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 DCAF4L1Q3SXM0 396 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 FASTKD1Q53R41 847 aaKnown RBP14.68□□□□□ -0.06
CDH3-201ENST00000264012 HABP4Q5JVS0 413 aaKnown RBP14.68□□□□□ -0.06
CDH3-201ENST00000264012 AP1ARQ63HQ0 302 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 MPZL3Q6UWV2 235 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 SRLQ86TD4 932 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 RNF135Q8IUD6 432 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 DPP3Q9NY33 737 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 DBR1Q9UK59 544 aaKnown RBP14.68□□□□□ -0.06
CDH3-201ENST00000264012 PPP2R3BQ9Y5P8 575 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 RIC1Q4ADV7 1423 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 FRMD3A2A2Y4 597 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 E5RI56 91 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 H0Y3Z8 333 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 ZC3H11AO75152 810 aaKnown RBP eCLIP14.68□□□□□ -0.06
CDH3-201ENST00000264012 PNPLA4P41247 253 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 ITGA8P53708 1063 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 EFHC1Q5JVL4 640 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 GLRA4Q5JXX5 417 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 ASIC4Q96FT7 647 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 PAK5Q9P286 719 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 TRIM33Q9UPN9 1127 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 TCP11X1B4DZS4 312 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 VIL1P09327 827 aaKnown RBP14.68□□□□□ -0.06
CDH3-201ENST00000264012 DSG3P32926 999 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 HERVK_113P62684 666 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 MYBPC2Q14324 1141 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 CLMNQ96JQ2 1002 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 ZIM3Q96PE6 472 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 ZBTB18Q99592 522 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 ETNK1Q9HBU6 452 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 GAKO14976 1311 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 F8VZ95 297 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 DPYSL4O14531 572 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 RHBDL3P58872 404 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 GRAMD1BQ3KR37 738 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 C2CD6Q53TS8 623 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 SLC7A14Q8TBB6 771 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 CHMP2BQ9UQN3 213 aa14.68□□□□□ -0.06
CDH3-201ENST00000264012 KBTBD13C9JR72 458 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 CHN1P15882 459 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 MAGEA4P43358 317 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 RARRES1P49788 294 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 TMEM119Q4V9L6 283 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 NOP9Q86U38 636 aaKnown RBP14.67□□□□□ -0.06
CDH3-201ENST00000264012 ASAP3Q8TDY4 903 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 PRMT1Q99873 361 aaKnown RBP14.67□□□□□ -0.06
CDH3-201ENST00000264012 VWA5AO00534 786 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 ACCSLQ4AC99 568 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 METTL7BQ6UX53 244 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 C15orf52Q6ZUT6 534 aaKnown RBP14.67□□□□□ -0.06
CDH3-201ENST00000264012 OTOP1Q7RTM1 612 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 ZNF571Q7Z3V5 609 aaPredicted RBP14.67□□□□□ -0.06
CDH3-201ENST00000264012 ATPAF2Q8N5M1 289 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 USP33Q8TEY7 942 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 CGRRF1Q99675 332 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 SPATC1LQ9H0A9 340 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 KLK14Q9P0G3 267 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 PSMC3IPQ9P2W1 217 aaPredicted RBP14.67□□□□□ -0.06
CDH3-201ENST00000264012 NEMP1O14524 444 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 SLITRK3O94933 977 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 GZMAP12544 262 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 GCLCP48506 637 aaPredicted RBP14.67□□□□□ -0.06
CDH3-201ENST00000264012 CYP24A1Q07973 514 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 MTM1Q13496 603 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 C4orf33Q8N1A6 199 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 SMYD3Q9H7B4 428 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 MYOM1P52179 1685 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 GTPBP10A4D1E9 387 aaKnown RBP14.67□□□□□ -0.06
CDH3-201ENST00000264012 FKBP1AP62942 108 aaKnown RBP14.67□□□□□ -0.06
CDH3-201ENST00000264012 BOLA3Q53S33 107 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 MTHFD1LQ6UB35 978 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 PLEKHH3Q7Z736 793 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 DNERQ8NFT8 737 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 HNRNPLLQ8WVV9 542 aaKnown RBP14.67□□□□□ -0.06
CDH3-201ENST00000264012 ACSF2Q96CM8 615 aaPredicted RBP14.67□□□□□ -0.06
CDH3-201ENST00000264012 BLOC1S4Q9NUP1 217 aa14.67□□□□□ -0.06
CDH3-201ENST00000264012 AP3B1O00203 1094 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 EPHX2P34913 555 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 FNTAP49354 379 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 SLC26A2P50443 739 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 SOX10P56693 466 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 RAD51Q06609 339 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms