RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 IGFLR1Q9H665 355 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 PCDHB8Q9UN66 801 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 ADAM12O43184 909 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 LILRB3O75022 631 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 CNPP09543 421 aaKnown RBP19.71■□□□□ 0.75
SDF4-201ENST00000263741 PNPLA4P41247 253 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 MTIF2P46199 727 aaKnown RBP19.71■□□□□ 0.75
SDF4-201ENST00000263741 ZNF165P49910 485 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 MYL7Q01449 175 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 ZNF699Q32M78 642 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 KRT39Q6A163 491 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 RSPO2Q6UXX9 243 aaPredicted RBP19.71■□□□□ 0.75
SDF4-201ENST00000263741 SCARA5Q6ZMJ2 495 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 DHX40Q8IX18 779 aaKnown RBP19.71■□□□□ 0.75
SDF4-201ENST00000263741 LNX1Q8TBB1 728 aaPredicted RBP19.71■□□□□ 0.75
SDF4-201ENST00000263741 NGRNQ9NPE2 291 aaKnown RBP19.71■□□□□ 0.75
SDF4-201ENST00000263741 NXF1Q9UBU9 619 aaKnown RBP19.71■□□□□ 0.75
SDF4-201ENST00000263741 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.71■□□□□ 0.75
SDF4-201ENST00000263741 KCNJ18B7U540 433 aa19.7■□□□□ 0.74
SDF4-201ENST00000263741 POU3F3P20264 500 aaPredicted RBP19.7■□□□□ 0.74
SDF4-201ENST00000263741 FMO5P49326 533 aa19.7■□□□□ 0.74
SDF4-201ENST00000263741 MYO1EQ12965 1108 aa19.7■□□□□ 0.74
SDF4-201ENST00000263741 KCNJ12Q14500 433 aa19.7■□□□□ 0.74
SDF4-201ENST00000263741 WSCD1Q658N2 575 aa19.7■□□□□ 0.74
SDF4-201ENST00000263741 PIK3R5Q8WYR1 880 aa19.7■□□□□ 0.74
SDF4-201ENST00000263741 HSD3B7Q9H2F3 369 aa19.7■□□□□ 0.74
SDF4-201ENST00000263741 TSPY26PQ9H489 355 aa19.7■□□□□ 0.74
SDF4-201ENST00000263741 L1RE1Q9UN81 338 aa19.7■□□□□ 0.74
SDF4-201ENST00000263741 SYN3O14994 580 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 HCRTO43612 131 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 ODC1P11926 461 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 MCCD1P59942 119 aaPredicted RBP19.69■□□□□ 0.74
SDF4-201ENST00000263741 ENPEPQ07075 957 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 HYAL1Q12794 435 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 KCNH2Q12809 1159 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 WDR72Q3MJ13 1102 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 NAT10Q9H0A0 1025 aaKnown RBP19.69■□□□□ 0.74
SDF4-201ENST00000263741 TLE6Q9H808 572 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 LMCD1Q9NZU5 365 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 MAGEC2Q9UBF1 373 aaPredicted RBP19.69■□□□□ 0.74
SDF4-201ENST00000263741 C5orf42Q9H799 3197 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 TEX28O15482 410 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 LINC01565O15544 149 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 GTF2H1P32780 548 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 RAP1GAPP47736 663 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 CDKAL1Q5VV42 579 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 LLGL2Q6P1M3 1020 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 MMS19Q96T76 1030 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 SMYD3Q9H7B4 428 aa19.69■□□□□ 0.74
SDF4-201ENST00000263741 APOBEC3GQ9HC16 384 aaKnown RBP19.69■□□□□ 0.74
SDF4-201ENST00000263741 SPTBN5Q9NRC6 3674 aaKnown RBP19.69■□□□□ 0.74
SDF4-201ENST00000263741 YWHAHQ04917 246 aaPredicted RBP19.68■□□□□ 0.74
SDF4-201ENST00000263741 SOWAHAQ2M3V2 549 aa19.68■□□□□ 0.74
SDF4-201ENST00000263741 FAM114A1Q8IWE2 563 aa19.68■□□□□ 0.74
SDF4-201ENST00000263741 PDCL2Q8N4E4 241 aa19.68■□□□□ 0.74
SDF4-201ENST00000263741 KLHL5Q96PQ7 755 aa19.68■□□□□ 0.74
SDF4-201ENST00000263741 CBX8Q9HC52 389 aa19.68■□□□□ 0.74
SDF4-201ENST00000263741 TAB2Q9NYJ8 693 aa19.68■□□□□ 0.74
SDF4-201ENST00000263741 STK39Q9UEW8 545 aa19.68■□□□□ 0.74
SDF4-201ENST00000263741 IRAK3Q9Y616 596 aa19.68■□□□□ 0.74
SDF4-201ENST00000263741 CDY1Q9Y6F8 540 aa19.68■□□□□ 0.74
SDF4-201ENST00000263741 STX10O60499 249 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 ASS1P00966 412 aaKnown RBP19.67■□□□□ 0.74
SDF4-201ENST00000263741 AFPP02771 609 aaKnown RBP19.67■□□□□ 0.74
SDF4-201ENST00000263741 TPM2P07951 284 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 OR4Q2P0C623 313 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 ARPP19P56211 112 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 NOP14P78316 857 aaKnown RBP19.67■□□□□ 0.74
SDF4-201ENST00000263741 CTXN3Q4LDR2 81 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 TCP11X2Q5H9J9 407 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 OVOS1Q6IE37 1185 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 PDE12Q6L8Q7 609 aaKnown RBP19.67■□□□□ 0.74
SDF4-201ENST00000263741 LUZP1Q86V48 1076 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 OSTM1Q86WC4 334 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 FBXL13Q8NEE6 735 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 APPL2Q8NEU8 664 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 VN1R2Q8NFZ6 395 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 TMEM209Q96SK2 561 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 CLSTN3Q9BQT9 956 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 GDAP2Q9NXN4 497 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 MTRRQ9UBK8 725 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 CLASP2O75122 1294 aaKnown RBP19.67■□□□□ 0.74
SDF4-201ENST00000263741 ATP1A3P13637 1013 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 TNNC1P63316 161 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 BMS1Q14692 1282 aaKnown RBP19.67■□□□□ 0.74
SDF4-201ENST00000263741 ANKS3Q6ZW76 656 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 PALB2Q86YC2 1186 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 BPIFA3Q9BQP9 254 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 RTP3Q9BQQ7 232 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 MRPL45Q9BRJ2 306 aaKnown RBP19.67■□□□□ 0.74
SDF4-201ENST00000263741 FBXL5Q9UKA1 691 aa19.67■□□□□ 0.74
SDF4-201ENST00000263741 HUS1O60921 280 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 SPATA31D3P0C874 917 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 CDH8P55286 799 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 LRMPQ12912 555 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 IQCB1Q15051 598 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 SKIV2LQ15477 1246 aaKnown RBP19.66■□□□□ 0.74
SDF4-201ENST00000263741 DUSP6Q16828 381 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 CCDC142Q17RM4 750 aa19.66■□□□□ 0.74
SDF4-201ENST00000263741 ZNF667Q5HYK9 610 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms