RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 PASKQ96RG2 1323 aa25.55■■□□□ 1.68
TSPAN13-201ENST00000262067 BHMG1C9JSJ3 638 aaPredicted RBP25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 POLR3GO15318 223 aaPredicted RBP25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 LSM8O95777 96 aaKnown RBP25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 POLR2BP30876 1174 aaKnown RBP25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 RWDD2BP57060 319 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 ZNF200P98182 395 aaPredicted RBP25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 DCAF4L1Q3SXM0 396 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 SEL1L2Q5TEA6 688 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 CCDC26Q8TAB7 109 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 SMYD3Q9H7B4 428 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 MRPL47Q9HD33 250 aaKnown RBP25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 AGAP1Q9UPQ3 857 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 C2CD2Q9Y426 696 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 TREHO43280 583 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 ATICP31939 592 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 SMYD5Q6GMV2 418 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 MAATS1Q7Z4T9 603 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 WDTC1Q8N5D0 677 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 CAVIN3Q969G5 261 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 ZIC5Q96T25 663 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 CELF4Q9BZC1 486 aaKnown RBP25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 ACBD3Q9H3P7 528 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 DPP3Q9NY33 737 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 PCDHGC3Q9UN70 934 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 TLL2Q9Y6L7 1015 aa25.54■■□□□ 1.68
TSPAN13-201ENST00000262067 GOLGA6L10A0A0M3HER8 536 aa25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 TTI1O43156 1089 aa25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 GJB6O95452 261 aa25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 FAM153BP0C7A2 387 aa25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 DARSP14868 501 aaKnown RBP25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 LACTBP83111 547 aaPredicted RBP25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 FAM153CQ494X1 144 aa25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 ZDHHC14Q8IZN3 488 aa25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 TMEM35BQ8NCS4 154 aa25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 HPDLQ96IR7 371 aa25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 FAXDC2Q96IV6 333 aa25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 EIF2AQ9BY44 585 aaKnown RBP25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 CXCL16Q9H2A7 254 aa25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 VRTNQ9H8Y1 702 aa25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 FAM153AQ9UHL3 310 aa25.53■■□□□ 1.68
TSPAN13-201ENST00000262067 PROSCO94903 275 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 SLC1A1P43005 524 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 RAD23BP54727 409 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 SREBF2Q12772 1141 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 SLC27A1Q6PCB7 646 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 KIF12Q96FN5 646 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 SNTG2Q9NY99 539 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 SCINQ9Y6U3 715 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 CD19P15391 556 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 ORC1Q13415 861 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 FSCN1Q16658 493 aaKnown RBP25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 WHAMMQ8TF30 809 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 CCDC102AQ96A19 550 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 ZNF518BQ9C0D4 1074 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 PARVAQ9NVD7 372 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 ITGA11Q9UKX5 1188 aa25.52■■□□□ 1.68
TSPAN13-201ENST00000262067 EIF4BP23588 611 aaKnown RBP25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 CDH5P33151 784 aaPredicted RBP25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 DAB2IPQ5VWQ8 1189 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 DENND1BQ6P3S1 775 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 DDX42Q86XP3 938 aaKnown RBP eCLIP25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 SLC13A5Q86YT5 568 aaPredicted RBP25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 PRELID2Q8N945 189 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 TWNKQ96RR1 684 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 TCRBV7S2A1N4TA0A589 114 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 TLR3O15455 904 aaKnown RBP25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 HSPA6P17066 643 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 AARSP49588 968 aaKnown RBP eCLIP25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 RBP5P82980 135 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 NNTQ13423 1086 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 PPP2R5EQ16537 467 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 NOTUMQ6P988 496 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 NT5DC4Q86YG4 428 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 CD302Q8IX05 232 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 TRPV1Q8NER1 839 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 FEZF2Q8TBJ5 459 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 HMGXB4Q9UGU5 601 aa25.51■■□□□ 1.67
TSPAN13-201ENST00000262067 CALB1P05937 261 aa25.5■■□□□ 1.67
TSPAN13-201ENST00000262067 PAEPP09466 180 aa25.5■■□□□ 1.67
TSPAN13-201ENST00000262067 SLC4A11Q8NBS3 891 aa25.5■■□□□ 1.67
TSPAN13-201ENST00000262067 TSEN2Q8NCE0 465 aaKnown RBP25.5■■□□□ 1.67
TSPAN13-201ENST00000262067 TMEM40Q8WWA1 233 aa25.5■■□□□ 1.67
TSPAN13-201ENST00000262067 CYP3A43Q9HB55 503 aa25.5■■□□□ 1.67
TSPAN13-201ENST00000262067 PRDM10Q9NQV6 1147 aa25.5■■□□□ 1.67
TSPAN13-201ENST00000262067 HES2Q9Y543 173 aa25.5■■□□□ 1.67
TSPAN13-201ENST00000262067 CILPO75339 1184 aa25.49■■□□□ 1.67
TSPAN13-201ENST00000262067 ECHS1P30084 290 aa25.49■■□□□ 1.67
TSPAN13-201ENST00000262067 PURAQ00577 322 aaKnown RBP25.49■■□□□ 1.67
TSPAN13-201ENST00000262067 GABPB1Q06547 395 aaPredicted RBP25.49■■□□□ 1.67
TSPAN13-201ENST00000262067 APBB1IPQ7Z5R6 666 aaPredicted RBP25.49■■□□□ 1.67
TSPAN13-201ENST00000262067 ELOVL4Q9GZR5 314 aa25.49■■□□□ 1.67
TSPAN13-201ENST00000262067 PLEKHA5Q9HAU0 1116 aa25.49■■□□□ 1.67
TSPAN13-201ENST00000262067 P4HA1P13674 534 aa25.49■■□□□ 1.67
TSPAN13-201ENST00000262067 AKR1A1P14550 325 aa25.49■■□□□ 1.67
TSPAN13-201ENST00000262067 TM4SF4P48230 202 aa25.49■■□□□ 1.67
TSPAN13-201ENST00000262067 RPL7AP62424 266 aaKnown RBP25.49■■□□□ 1.67
TSPAN13-201ENST00000262067 CUL1Q13616 776 aa25.49■■□□□ 1.67
TSPAN13-201ENST00000262067 SNX17Q15036 470 aa25.49■■□□□ 1.67
TSPAN13-201ENST00000262067 PCBP1Q15365 356 aaKnown RBP eCLIP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms