RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 FOXR2Q6PJQ5 311 aa14.45□□□□□ -0.1
SGCA-201ENST00000262018 PRSS55Q6UWB4 352 aaPredicted RBP14.45□□□□□ -0.1
SGCA-201ENST00000262018 APTXQ7Z2E3 356 aaKnown RBP14.45□□□□□ -0.1
SGCA-201ENST00000262018 KSR1Q8IVT5 923 aa14.45□□□□□ -0.1
SGCA-201ENST00000262018 ZNF687Q8N1G0 1237 aa14.45□□□□□ -0.1
SGCA-201ENST00000262018 FAM160A2Q8N612 972 aaPredicted RBP14.45□□□□□ -0.1
SGCA-201ENST00000262018 NOC3LQ8WTT2 800 aaKnown RBP14.45□□□□□ -0.1
SGCA-201ENST00000262018 NAP1L5Q96NT1 182 aaPredicted RBP14.45□□□□□ -0.1
SGCA-201ENST00000262018 BHMT2Q9H2M3 363 aa14.45□□□□□ -0.1
SGCA-201ENST00000262018 SLC39A2Q9NP94 309 aa14.45□□□□□ -0.1
SGCA-201ENST00000262018 RXFP3Q9NSD7 469 aa14.45□□□□□ -0.1
SGCA-201ENST00000262018 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.45□□□□□ -0.1
SGCA-201ENST00000262018 WRAP73Q9P2S5 460 aaPredicted RBP14.45□□□□□ -0.1
SGCA-201ENST00000262018 IMPACTQ9P2X3 320 aa14.45□□□□□ -0.1
SGCA-201ENST00000262018 SEPT9Q9UHD8 586 aaPredicted RBP14.45□□□□□ -0.1
SGCA-201ENST00000262018 LHX6Q9UPM6 363 aa14.45□□□□□ -0.1
SGCA-201ENST00000262018 ZKSCAN5Q9Y2L8 839 aa14.45□□□□□ -0.1
SGCA-201ENST00000262018 SETXQ7Z333 2677 aaKnown RBP14.44□□□□□ -0.1
SGCA-201ENST00000262018 F5P12259 2224 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 NPHP3-ACAD11A0A0J9YXS1 232 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 AXIN1O15169 862 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 ECI2O75521 394 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 STBD1O95210 358 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 KRT18P05783 430 aaKnown RBP14.44□□□□□ -0.1
SGCA-201ENST00000262018 ITGA4P13612 1032 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 YWHABP31946 246 aaKnown RBP14.44□□□□□ -0.1
SGCA-201ENST00000262018 CNR2P34972 360 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 PMS1P54277 932 aaKnown RBP14.44□□□□□ -0.1
SGCA-201ENST00000262018 DSC1Q08554 894 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 FAM26FQ5R3K3 315 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 UBXN11Q5T124 520 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 CENPPQ6IPU0 288 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 PSAPL1Q6NUJ1 521 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 ANO5Q75V66 913 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 OTUD6AQ7L8S5 288 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 CCDC186Q7Z3E2 898 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 GPR65Q8IYL9 337 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 DNASE1L2Q92874 299 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 HPS3Q969F9 1004 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 MCRS1Q96EZ8 462 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 GAD1Q99259 594 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 SH2D3AQ9BRG2 576 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 RUSC1Q9BVN2 902 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 NIFKQ9BYG3 293 aaKnown RBP14.44□□□□□ -0.1
SGCA-201ENST00000262018 THAP9Q9H5L6 903 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 HCFC1R1Q9NWW0 138 aa14.44□□□□□ -0.1
SGCA-201ENST00000262018 LIMA1Q9UHB6 759 aaKnown RBP14.44□□□□□ -0.1
SGCA-201ENST00000262018 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.44□□□□□ -0.1
SGCA-201ENST00000262018 A0A1B0GTH6 734 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 TMEM150BA6NC51 233 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 TRIM49BA6NDI0 452 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 LRRC10BA6NIK2 292 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 SRRM3A6NNA2 597 aaPredicted RBP14.43□□□□□ -0.1
SGCA-201ENST00000262018 SCNN1GP51170 649 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 RING1Q06587 406 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 PABPC1LQ4VXU2 614 aaKnown RBP14.43□□□□□ -0.1
SGCA-201ENST00000262018 HSP90AA4PQ58FG1 418 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 RINT1Q6NUQ1 792 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 C1orf186Q6ZWK4 172 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 LONP2Q86WA8 852 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 PIGOQ8TEQ8 1089 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 DUSP9Q99956 384 aaKnown RBP14.43□□□□□ -0.1
SGCA-201ENST00000262018 ARRDC1-AS1Q9H2J1 176 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 UBN1Q9NPG3 1134 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 INTS13Q9NVM9 706 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 MIOSQ9NXC5 875 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 KCND2Q9NZV8 630 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 PPME1Q9Y570 386 aa14.43□□□□□ -0.1
SGCA-201ENST00000262018 ARL5CA6NH57 179 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 ZNF500O60304 480 aaPredicted RBP14.42□□□□□ -0.1
SGCA-201ENST00000262018 SPINK2P20155 84 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 MLH1P40692 756 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 FOXC1Q12948 553 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 NR1I3Q14994 352 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 ANKRD40Q6AI12 368 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 TANGO2Q6ICL3 276 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 IRF2BP1Q8IU81 584 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 VSTM4Q8IW00 320 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 SMG8Q8ND04 991 aaKnown RBP14.42□□□□□ -0.1
SGCA-201ENST00000262018 FAM3CQ92520 227 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 RABGGTAQ92696 567 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 REEP2Q9BRK0 252 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 LSM14BQ9BX40 385 aaKnown RBP14.42□□□□□ -0.1
SGCA-201ENST00000262018 BRD9Q9H8M2 597 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 ANKEF1Q9NU02 776 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 DNMT3BQ9UBC3 853 aaKnown RBP14.42□□□□□ -0.1
SGCA-201ENST00000262018 ADAM28Q9UKQ2 775 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 MRPS23Q9Y3D9 190 aaKnown RBP14.42□□□□□ -0.1
SGCA-201ENST00000262018 SDK1Q7Z5N4 2213 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 SPEGQ15772 3267 aa14.42□□□□□ -0.1
SGCA-201ENST00000262018 IGKV6-21A0A0C4DH24 114 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 TMEM8BA6NDV4 472 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 ZBTB39O15060 712 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 ZNF806P0C7X5 589 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 GAP43P17677 238 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 HOXA9P31269 272 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 HOXA11P31270 313 aaPredicted RBP14.41□□□□□ -0.1
SGCA-201ENST00000262018 GSDMDP57764 484 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 GRM2Q14416 872 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 TCP11X2Q5H9J9 407 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms