RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 RNF169Q8NCN4 708 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 KLHL29Q96CT2 875 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 TMEM134Q9H6X4 195 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SNTNA6NMZ2 147 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 RASA4BC9J798 803 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 CLIC2O15247 247 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 RASA4O43374 803 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 FAM200BP0CF97 657 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PPP6R3Q5H9R7 873 aaPredicted RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PLEKHH3Q7Z736 793 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 ANKRD42Q8N9B4 389 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 EXD1Q8NHP7 514 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SLC7A14Q8TBB6 771 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 TADA1Q96BN2 335 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 CGRRF1Q99675 332 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 ZBED2Q9BTP6 218 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PRRG3Q9BZD7 231 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 STN1Q9H668 368 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 C8orf4Q9NR00 106 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 TBX20Q9UMR3 447 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 QSOX1O00391 747 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 GEMP55040 296 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 NCKAP1LP55160 1127 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PRMT2P55345 433 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PRMT9Q6P2P2 845 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 FAM173BQ6P4H8 233 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PBXIP1Q96AQ6 731 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 FAM213AQ9BRX8 229 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 RWDD3Q9Y3V2 267 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PCDHB7Q9Y5E2 793 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SPDYE2BA6NHP3 402 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 H3BMM5 538 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SPDYE6P0CI01 402 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 FCGR1AP12314 374 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 MAP4P27816 1152 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 MAGEA9P43362 315 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 HARS2P49590 506 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 FXR1P51114 621 aaKnown RBP eCLIP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 UBE2SQ16763 222 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SYCP2LQ5T4T6 812 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 LCA5Q86VQ0 697 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 TRIM69Q86WT6 500 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 LINC00116Q8NCU8 138 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 C1QTNF7Q9BXJ2 289 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 ARL2BPQ9Y2Y0 163 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 ADAMTSL3P82987 1691 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 CYP3A7-CYP3A51PA0A087WV96 503 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 RASSF10A6NK89 507 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SLC16A4O15374 487 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SUPT3HO75486 399 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 CYP3A7P24462 503 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 HOXA13P31271 388 aaPredicted RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 AARSP49588 968 aaKnown RBP eCLIP4.52□□□□□ -1.692e-7■■■■□ 26.2
VPS13C-202ENST00000261517 PRKCEQ02156 737 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 NFIL3Q16649 462 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 ACTRT1Q8TDG2 376 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PGBD1Q96JS3 809 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 CCDC138Q96M89 665 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PARD6BQ9BYG5 372 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 CEP44Q9C0F1 390 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 GOLPH3Q9H4A6 298 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 DCDC2Q9UHG0 476 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PHF20L1A8MW92 1017 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 RIPPLY1Q0D2K3 151 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 DYNC1I2Q13409 638 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 MTMR2Q13614 643 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 TAF1CQ15572 869 aaPredicted RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 CCDC137Q6PK04 289 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 RHPN2Q8IUC4 686 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SLC22A9Q8IVM8 553 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 KCNK16Q96T55 309 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 MMTAG2Q9BU76 263 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 RAVER2Q9HCJ3 691 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 NGRNQ9NPE2 291 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 AVENQ9NQS1 362 aaPredicted RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 GIMAP4Q9NUV9 329 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PLAAQ9Y263 795 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 NID2Q14112 1375 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SOWAHDA6NJG2 315 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 E7ENQ6 273 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 GOLGA8SH3BPF8 625 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 TM9SF1O15321 606 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 ATP2C2O75185 946 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 RPN2P04844 631 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 MMEP08473 750 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 POLD2P49005 469 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 EFTUD2Q15029 972 aaKnown RBP eCLIP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PDIA6Q15084 440 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 FAM102AQ5T9C2 384 aaPredicted RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 TTC39BQ5VTQ0 682 aaPredicted RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 BSPRYQ5W0U4 402 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 IQSEC1Q6DN90 963 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 RWDD4Q6NW29 188 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 INTS5Q6P9B9 1019 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SHC4Q6S5L8 630 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PPIL6Q8IXY8 311 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 RYBPQ8N488 228 aaPredicted RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SKA2Q8WVK7 121 aaPredicted RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 RIN2Q8WYP3 895 aaPredicted RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PRMT6Q96LA8 375 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms