RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 KATNAL1Q9BW62 490 aa19.58■□□□□ 0.72
SMARCC1-201ENST00000254480 MAGEA9P43362 315 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 RABGAP1LQ5R372 815 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 TSC22D3Q99576 134 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 EML4Q9HC35 981 aaKnown RBP19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 MSH4O15457 936 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 KRT4P19013 534 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 C16orf87Q6PH81 154 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 LAYNQ6UX15 382 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 POP1Q99575 1024 aaKnown RBP19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 ERAP1Q9NZ08 941 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 CD274Q9NZQ7 290 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 ANGPT2O15123 496 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 KLRC1P26715 233 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 THPOP40225 353 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 GLB1LQ6UWU2 654 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 DNAAF5Q86Y56 855 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 CYFIP2Q96F07 1278 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 CPB2Q96IY4 423 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 TSSK1BQ9BXA7 367 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 SLC24A3Q9HC58 644 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 SH3BP1Q9Y3L3 701 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 ATP5HO75947 161 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 VTNP04004 478 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 PTK7Q13308 1070 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 NAB2Q15742 525 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 HPS5Q9UPZ3 1129 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 SLC30A1Q9Y6M5 507 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 MED14O60244 1454 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 KDM6AO15550 1401 aaPredicted RBP19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 DGKDQ16760 1214 aa19.57■□□□□ 0.72
SMARCC1-201ENST00000254480 HIST1H2AGP0C0S8 130 aaPredicted RBP19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 HIST1H2ADP20671 130 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 CLCN3P51790 818 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 ITGA8P53708 1063 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 PIGHQ14442 188 aaPredicted RBP19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 HIST1H2AHQ96KK5 128 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 HIST1H2AJQ99878 128 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 H2AFJQ9BTM1 129 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 FAM96AQ9H5X1 160 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 UVRAGQ9P2Y5 699 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 STOML1Q9UBI4 398 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 PJA2O43164 708 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 AVPR1AP37288 418 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 TMEM8AQ9HCN3 771 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 ALG6Q9Y672 507 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 PITPNM2Q9BZ72 1349 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 RAP1GAPP47736 663 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 CARSP49589 748 aaKnown RBP19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 ZNF200P98182 395 aaPredicted RBP19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 ZRANB3Q5FWF4 1079 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 MROH9Q5TGP6 573 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 SLC30A10Q6XR72 485 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 DEFB132Q7Z7B7 95 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 ADNPQ9H2P0 1102 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 CAPN10Q9HC96 672 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 CHCHD3Q9NX63 227 aaKnown RBP19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 MRPL42Q9Y6G3 142 aaKnown RBP19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 ARHGAP10A1A4S6 786 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 EXTL3O43909 919 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 UBE3AQ05086 875 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 CHSY1Q86X52 802 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 GPD1P21695 349 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 PLIN5Q00G26 463 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 KCNT1Q5JUK3 1230 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 RASGRP2Q7LDG7 609 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 SNX31Q8N9S9 440 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 THAP2Q9H0W7 228 aa19.56■□□□□ 0.72
SMARCC1-201ENST00000254480 SOX10P56693 466 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 GTF2H3Q13889 308 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 JAMLQ86YT9 394 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 DDX50Q9BQ39 737 aaKnown RBP19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 TRIM62Q9BVG3 475 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 POLLQ9UGP5 575 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 C1orf167Q5SNV9 1468 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 JCADQ9P266 1359 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 MYO1GB0I1T2 1018 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 AIM2O14862 343 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 RPA1P27694 616 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 TIPINQ9BVW5 301 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 PMPCBO75439 489 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 STX3Q13277 289 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 SV2CQ496J9 727 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 CDC42BPBQ9Y5S2 1711 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 FBXO16Q8IX29 292 aaPredicted RBP19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 PARP9Q8IXQ6 854 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 B4GALNT2Q8NHY0 566 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 ZFYVE19Q96K21 471 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 PCDHB7Q9Y5E2 793 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 CD4P01730 458 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 ARHGEF7Q14155 803 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 HIC1Q14526 733 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 KLHDC7AQ5VTJ3 777 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 ARHGAP26Q9UNA1 814 aa19.55■□□□□ 0.72
SMARCC1-201ENST00000254480 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 ZNF263O14978 683 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 MAGEB2O15479 319 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 CCDC22O60826 627 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 SGPL1O95470 568 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms