RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 HELQQ8TDG4 1101 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 EPS8L1Q8TE68 723 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 KRT12Q99456 494 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 DICER1Q9UPY3 1922 aaKnown RBP12.41□□□□□ -0.42
LIN28A-201ENST00000254231 GOLGA6L9A6NEM1 432 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 CYBAP13498 195 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 SP100P23497 879 aaPredicted RBP12.41□□□□□ -0.42
LIN28A-201ENST00000254231 PSMD6Q15008 389 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 ZNF606Q8WXB4 792 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 TFAP2BQ92481 460 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 PAWRQ96IZ0 340 aaKnown RBP12.41□□□□□ -0.42
LIN28A-201ENST00000254231 CGRRF1Q99675 332 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 DDX47Q9H0S4 455 aaKnown RBP12.41□□□□□ -0.42
LIN28A-201ENST00000254231 SNX25Q9H3E2 840 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 FZD8Q9H461 694 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 GTF3C4Q9UKN8 822 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 ZMYND8Q9ULU4 1186 aaPredicted RBP12.41□□□□□ -0.42
LIN28A-201ENST00000254231 CEP83Q9Y592 693 aa12.41□□□□□ -0.42
LIN28A-201ENST00000254231 VPS13AQ96RL7 3174 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 ZNF646O15015 1829 aaPredicted RBP12.4□□□□□ -0.42
LIN28A-201ENST00000254231 O00370 1275 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 CHRNA1P02708 482 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 C4BPAP04003 597 aaKnown RBP12.4□□□□□ -0.42
LIN28A-201ENST00000254231 KCNJ1P48048 391 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 RPL7AP62424 266 aaKnown RBP12.4□□□□□ -0.42
LIN28A-201ENST00000254231 TAF5Q15542 800 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 DNAJC21Q5F1R6 531 aaKnown RBP12.4□□□□□ -0.42
LIN28A-201ENST00000254231 CCDC25Q86WR0 208 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 ZNF354CQ86Y25 554 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 MCEEQ96PE7 176 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 MRPL45Q9BRJ2 306 aaKnown RBP12.4□□□□□ -0.42
LIN28A-201ENST00000254231 CPSF3Q9UKF6 684 aaKnown RBP12.4□□□□□ -0.42
LIN28A-201ENST00000254231 SLC45A1Q9Y2W3 748 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 MYO1FO00160 1098 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 POLR3GO15318 223 aaPredicted RBP12.4□□□□□ -0.42
LIN28A-201ENST00000254231 B4GALT4O60513 344 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 SOAT2O75908 522 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 IFNB1P01574 187 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 MYO1EQ12965 1108 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 ERICH1Q86X53 443 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 MYRIPQ8NFW9 859 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 MFSD14AQ96MC6 490 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 ZBED2Q9BTP6 218 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 KIAA1586Q9HCI6 787 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 LRFN2Q9ULH4 789 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 TTC3P53804 2025 aa12.4□□□□□ -0.42
LIN28A-201ENST00000254231 SMIM28A0A1B0GU29 152 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 HOXC6P09630 235 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 CTNNA2P26232 953 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 SOX4Q06945 474 aaPredicted RBP12.39□□□□□ -0.43
LIN28A-201ENST00000254231 SGSM1Q2NKQ1 1148 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 PPP6R3Q5H9R7 873 aaPredicted RBP12.39□□□□□ -0.43
LIN28A-201ENST00000254231 ZPBP2Q6X784 338 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 MICAL1Q8TDZ2 1067 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 STRA6Q9BX79 667 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 CLCNKBP51801 687 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 MRPS6P82932 125 aaKnown RBP12.39□□□□□ -0.43
LIN28A-201ENST00000254231 WSCD1Q658N2 575 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 PRUNE1Q86TP1 453 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 PAF1Q8N7H5 531 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 HDAC7Q8WUI4 952 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 HSPH1Q92598 858 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 KRT35Q92764 455 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 CCDC114Q96M63 670 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 MIOSQ9NXC5 875 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 KCNG1Q9UIX4 513 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 TNFSF13BQ9Y275 285 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 PDE2AO00408 941 aaPredicted RBP12.39□□□□□ -0.43
LIN28A-201ENST00000254231 HUS1O60921 280 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 FGGP02679 453 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 RPL17P18621 184 aaKnown RBP12.39□□□□□ -0.43
LIN28A-201ENST00000254231 LONRF2Q1L5Z9 754 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 DDX42Q86XP3 938 aaKnown RBP eCLIP12.39□□□□□ -0.43
LIN28A-201ENST00000254231 TRIM58Q8NG06 486 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 LMO3Q8TAP4 145 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 ZNF564Q8TBZ8 553 aaPredicted RBP12.39□□□□□ -0.43
LIN28A-201ENST00000254231 KHSRPQ92945 711 aaKnown RBP eCLIP12.39□□□□□ -0.43
LIN28A-201ENST00000254231 CALN1Q9BXU9 219 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 NIF3L1Q9GZT8 377 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 SAE1Q9UBE0 346 aaPredicted RBP12.39□□□□□ -0.43
LIN28A-201ENST00000254231 GTF2IRD1Q9UHL9 959 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 OTOFQ9HC10 1997 aa12.39□□□□□ -0.43
LIN28A-201ENST00000254231 DENND1BQ6P3S1 775 aa12.38□□□□□ -0.43
LIN28A-201ENST00000254231 TSHZ1Q6ZSZ6 1077 aa12.38□□□□□ -0.43
LIN28A-201ENST00000254231 PCSK9Q8NBP7 692 aaKnown RBP12.38□□□□□ -0.43
LIN28A-201ENST00000254231 BEST2Q8NFU1 509 aa12.38□□□□□ -0.43
LIN28A-201ENST00000254231 ERO1AQ96HE7 468 aa12.38□□□□□ -0.43
LIN28A-201ENST00000254231 NUCKS1Q9H1E3 243 aaKnown RBP12.38□□□□□ -0.43
LIN28A-201ENST00000254231 GPATCH2LQ9NWQ4 482 aa12.38□□□□□ -0.43
LIN28A-201ENST00000254231 AMFRQ9UKV5 643 aa12.38□□□□□ -0.43
LIN28A-201ENST00000254231 KIF2AO00139 706 aaPredicted RBP12.38□□□□□ -0.43
LIN28A-201ENST00000254231 HMBSP08397 361 aa12.38□□□□□ -0.43
LIN28A-201ENST00000254231 FAM102AQ5T9C2 384 aaPredicted RBP12.38□□□□□ -0.43
LIN28A-201ENST00000254231 SLC9A9Q8IVB4 645 aa12.38□□□□□ -0.43
LIN28A-201ENST00000254231 EXOC8Q8IYI6 725 aa12.38□□□□□ -0.43
LIN28A-201ENST00000254231 AUTS2Q8WXX7 1259 aa12.38□□□□□ -0.43
LIN28A-201ENST00000254231 TMEM134Q9H6X4 195 aa12.38□□□□□ -0.43
LIN28A-201ENST00000254231 FAM105AQ9NUU6 356 aa12.38□□□□□ -0.43
LIN28A-201ENST00000254231 SIX4Q9UIU6 781 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms