RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 SSTR3P32745 418 aaPredicted RBP17.39■□□□□ 0.38
HOXD3-201ENST00000249440 SF3A3Q12874 501 aaKnown RBP eCLIP17.39■□□□□ 0.38
HOXD3-201ENST00000249440 ZBTB41Q5SVQ8 909 aa17.39■□□□□ 0.38
HOXD3-201ENST00000249440 HIBCHQ6NVY1 386 aaPredicted RBP17.39■□□□□ 0.38
HOXD3-201ENST00000249440 ARHGEF18Q6ZSZ5 1173 aa17.39■□□□□ 0.38
HOXD3-201ENST00000249440 TMEM134Q9H6X4 195 aa17.39■□□□□ 0.38
HOXD3-201ENST00000249440 USP15Q9Y4E8 981 aaPredicted RBP17.39■□□□□ 0.38
HOXD3-201ENST00000249440 ADGRA2Q96PE1 1338 aa17.39■□□□□ 0.37
HOXD3-201ENST00000249440 CNTNAP2Q9UHC6 1331 aa17.39■□□□□ 0.37
HOXD3-201ENST00000249440 MMP8P22894 467 aa17.39■□□□□ 0.37
HOXD3-201ENST00000249440 P3H1Q32P28 736 aa17.39■□□□□ 0.37
HOXD3-201ENST00000249440 ZFYVE27Q5T4F4 411 aa17.39■□□□□ 0.37
HOXD3-201ENST00000249440 NUGGCQ68CJ6 796 aa17.39■□□□□ 0.37
HOXD3-201ENST00000249440 CATSPERGQ6ZRH7 1159 aa17.39■□□□□ 0.37
HOXD3-201ENST00000249440 MICALL2Q8IY33 904 aa17.39■□□□□ 0.37
HOXD3-201ENST00000249440 ANKRD42Q8N9B4 389 aa17.39■□□□□ 0.37
HOXD3-201ENST00000249440 OR5B17Q8NGF7 314 aa17.39■□□□□ 0.37
HOXD3-201ENST00000249440 CKAP2Q8WWK9 683 aa17.39■□□□□ 0.37
HOXD3-201ENST00000249440 FAM212AQ96EL1 285 aa17.39■□□□□ 0.37
HOXD3-201ENST00000249440 NIFKQ9BYG3 293 aaKnown RBP17.39■□□□□ 0.37
HOXD3-201ENST00000249440 NAALADL1Q9UQQ1 740 aa17.39■□□□□ 0.37
HOXD3-201ENST00000249440 ACTL7BQ9Y614 415 aa17.39■□□□□ 0.37
HOXD3-201ENST00000249440 SOCS7O14512 581 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 SUN1O94901 812 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 TJP3O95049 919 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 OAS1P00973 400 aaKnown RBP17.38■□□□□ 0.37
HOXD3-201ENST00000249440 ICAM3P32942 547 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 RDXP35241 583 aaKnown RBP17.38■□□□□ 0.37
HOXD3-201ENST00000249440 AP3M2P53677 418 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 ZCCHC9Q8N567 271 aaKnown RBP17.38■□□□□ 0.37
HOXD3-201ENST00000249440 C9orf72Q96LT7 481 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 RBM15Q96T37 977 aaKnown RBP eCLIP17.38■□□□□ 0.37
HOXD3-201ENST00000249440 FGFR1OP2Q9NVK5 253 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 HOXC10Q9NYD6 342 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.38■□□□□ 0.37
HOXD3-201ENST00000249440 TBK1Q9UHD2 729 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 GJA3Q9Y6H8 435 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 CALB1P05937 261 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 RFC5P40937 340 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 RPL7AP62424 266 aaKnown RBP17.38■□□□□ 0.37
HOXD3-201ENST00000249440 MCL1Q07820 350 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 MKRN3Q13064 507 aaKnown RBP17.38■□□□□ 0.37
HOXD3-201ENST00000249440 DRICH1Q6PGQ1 229 aaPredicted RBP17.38■□□□□ 0.37
HOXD3-201ENST00000249440 ANKS1BQ7Z6G8 1248 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 RIBC1Q8N443 379 aaPredicted RBP17.38■□□□□ 0.37
HOXD3-201ENST00000249440 DNERQ8NFT8 737 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 ZNF526Q8TF50 670 aaPredicted RBP17.38■□□□□ 0.37
HOXD3-201ENST00000249440 CD248Q9HCU0 757 aa17.38■□□□□ 0.37
HOXD3-201ENST00000249440 TMEM191CA6NGB0 347 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 LIASO43766 372 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 ABHD2P08910 425 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 TMEM191BP0C7N4 346 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 STX2P32856 288 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 MAGEA4P43358 317 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 ZNF132P52740 706 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 CYP4X1Q8N118 509 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 PLCD4Q9BRC7 762 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 NKIRAS1Q9NYS0 192 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 ZNF148Q9UQR1 794 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 MGRN1O60291 552 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 GJB6O95452 261 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 ATF7P17544 494 aaPredicted RBP17.37■□□□□ 0.37
HOXD3-201ENST00000249440 LRRC38Q5VT99 294 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 KAZNQ674X7 775 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 PPP1R21Q6ZMI0 780 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 CCDC91Q7Z6B0 441 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 SRRM1Q8IYB3 904 aaKnown RBP17.37■□□□□ 0.37
HOXD3-201ENST00000249440 ANKRD35Q8N283 1001 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 GBP7Q8N8V2 638 aaPredicted RBP17.37■□□□□ 0.37
HOXD3-201ENST00000249440 CFAP57Q96MR6 1250 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 SLITRK1Q96PX8 696 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 NRBP2Q9NSY0 501 aa17.37■□□□□ 0.37
HOXD3-201ENST00000249440 IGKV6D-21A0A0A0MT36 114 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 DNALI1O14645 258 aaPredicted RBP17.36■□□□□ 0.37
HOXD3-201ENST00000249440 ADCY3O60266 1144 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 LSM8O95777 96 aaKnown RBP17.36■□□□□ 0.37
HOXD3-201ENST00000249440 ASS1P00966 412 aaKnown RBP17.36■□□□□ 0.37
HOXD3-201ENST00000249440 KRT10P13645 584 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 COPS2P61201 443 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 MPP2Q14168 576 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 ATP13A4Q4VNC1 1196 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 FAM133BQ5BKY9 247 aaKnown RBP17.36■□□□□ 0.37
HOXD3-201ENST00000249440 ZPBP2Q6X784 338 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 WDR49Q8IV35 697 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 CCDC63Q8NA47 563 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 GDAP1Q8TB36 358 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 MAGEB18Q96M61 343 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 MLXIPLQ9NP71 852 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 ABCF3Q9NUQ8 709 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 KLHL11Q9NVR0 708 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 DNPEPQ9ULA0 475 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 LCTP09848 1927 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 CFAP73A6NFT4 308 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 FOXO6A8MYZ6 492 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 PI4K2BG5E9Z4 385 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 CST3P01034 146 aaPredicted RBP17.36■□□□□ 0.37
HOXD3-201ENST00000249440 KRT1P04264 644 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 EDN1P05305 212 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 CETPP11597 493 aa17.36■□□□□ 0.37
HOXD3-201ENST00000249440 HARSP12081 509 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms