RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.16□□□□□ -0.46
SOX9-201ENST00000245479 TLR3O15455 904 aaKnown RBP12.16□□□□□ -0.46
SOX9-201ENST00000245479 TMEM191BP0C7N4 346 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 SPIRE1Q08AE8 756 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 THOC5Q13769 683 aaKnown RBP12.16□□□□□ -0.46
SOX9-201ENST00000245479 STAT4Q14765 748 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 MIS18BP1Q6P0N0 1132 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 BTNL9Q6UXG8 535 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 SLC26A7Q8TE54 656 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 PYROXD1Q8WU10 500 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 PRPF31Q8WWY3 499 aaKnown RBP12.16□□□□□ -0.46
SOX9-201ENST00000245479 CENPTQ96BT3 561 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 PCDHB18PQ96TA0 734 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 THEGQ9P2T0 379 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 TOGARAM1Q9Y4F4 1720 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 SIPA1L3O60292 1781 aaPredicted RBP12.16□□□□□ -0.46
SOX9-201ENST00000245479 IGKV6D-41A0A0C4DH26 115 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 ETS1P14921 441 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 PSMC5P62195 406 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 RIPK1Q13546 671 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 AMHR2Q16671 573 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 IZUMO3Q5VZ72 239 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 EMC1Q8N766 993 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 RNF149Q8NC42 400 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 TSNARE1Q96NA8 513 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 SERPINB12Q96P63 405 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 MAK16Q9BXY0 300 aaKnown RBP12.16□□□□□ -0.46
SOX9-201ENST00000245479 CDC42EP4Q9H3Q1 356 aaKnown RBP12.16□□□□□ -0.46
SOX9-201ENST00000245479 CHST7Q9NS84 486 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 RBAKQ9NYW8 714 aaPredicted RBP12.16□□□□□ -0.46
SOX9-201ENST00000245479 TRAF3IP3Q9Y228 551 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 LRCH1Q9Y2L9 728 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 SMCHD1A6NHR9 2005 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 KAT6AQ92794 2004 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 BANF1O75531 89 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 KITP10721 976 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 RALAP11233 206 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 CREB1P16220 341 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 HIRAP54198 1017 aaPredicted RBP12.15□□□□□ -0.46
SOX9-201ENST00000245479 BASP1P80723 227 aaKnown RBP12.15□□□□□ -0.46
SOX9-201ENST00000245479 MRPS9P82933 396 aaKnown RBP12.15□□□□□ -0.46
SOX9-201ENST00000245479 OVGP1Q12889 678 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 DALRD3Q5D0E6 543 aaKnown RBP12.15□□□□□ -0.46
SOX9-201ENST00000245479 RABGAP1LQ5R372 815 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 ACBD5Q5T8D3 534 aaPredicted RBP12.15□□□□□ -0.46
SOX9-201ENST00000245479 CENPUQ71F23 418 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 EIF1ADQ8N9N8 165 aaKnown RBP12.15□□□□□ -0.46
SOX9-201ENST00000245479 RBBP8NLQ8NC74 664 aaPredicted RBP12.15□□□□□ -0.46
SOX9-201ENST00000245479 GINM1Q9NU53 330 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 GGA3Q9NZ52 723 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 PCDHA2Q9Y5H9 948 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 CYP3A7-CYP3A51PA0A087WV96 503 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 DNAJC6O75061 913 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 KRT1P04264 644 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 RAP1GAPP47736 663 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 GCLCP48506 637 aaPredicted RBP12.15□□□□□ -0.46
SOX9-201ENST00000245479 TMPRSS15P98073 1019 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 CAV1Q03135 178 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 CCDC125Q86Z20 511 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 RNF169Q8NCN4 708 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 MORC4Q8TE76 937 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 OPTNQ96CV9 577 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 GMCL1Q96IK5 515 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 NUF2Q9BZD4 464 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.15□□□□□ -0.467e-7■■■□□ 14.9
SOX9-201ENST00000245479 PIM2Q9P1W9 311 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 DOT1LQ8TEK3 1739 aa12.15□□□□□ -0.46
SOX9-201ENST00000245479 DKC1O60832 514 aaKnown RBP eCLIP12.15□□□□□ -0.47
SOX9-201ENST00000245479 ENTPD3O75355 529 aa12.15□□□□□ -0.47
SOX9-201ENST00000245479 CBX6O95503 412 aa12.15□□□□□ -0.47
SOX9-201ENST00000245479 CFHP08603 1231 aa12.15□□□□□ -0.47
SOX9-201ENST00000245479 GNA15P30679 374 aa12.15□□□□□ -0.47
SOX9-201ENST00000245479 CDH8P55286 799 aa12.15□□□□□ -0.47
SOX9-201ENST00000245479 PTENP60484 403 aa12.15□□□□□ -0.47
SOX9-201ENST00000245479 BLMHQ13867 455 aa12.15□□□□□ -0.47
SOX9-201ENST00000245479 FAXCQ5TGI0 409 aa12.15□□□□□ -0.47
SOX9-201ENST00000245479 FAM160B2Q86V87 743 aa12.15□□□□□ -0.47
SOX9-201ENST00000245479 TRIML2Q8N7C3 387 aa12.15□□□□□ -0.47
SOX9-201ENST00000245479 ATP6V0A1Q93050 837 aa12.15□□□□□ -0.47
SOX9-201ENST00000245479 POLR3CQ9BUI4 534 aaPredicted RBP12.15□□□□□ -0.47
SOX9-201ENST00000245479 TUFT1Q9NNX1 390 aa12.15□□□□□ -0.47
SOX9-201ENST00000245479 SLC12A6Q9UHW9 1150 aa12.15□□□□□ -0.47
SOX9-201ENST00000245479 AGO2Q9UKV8 859 aaKnown RBP12.15□□□□□ -0.47
SOX9-201ENST00000245479 CHMP2BQ9UQN3 213 aa12.15□□□□□ -0.47
SOX9-201ENST00000245479 IGLV3-22A0A075B6J6 115 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 DPPA5A6NC42 116 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 ENO1P06733 434 aaKnown RBP12.14□□□□□ -0.47
SOX9-201ENST00000245479 CYP11B1P15538 503 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 RGS7P49802 495 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 NLRP11P59045 1033 aaKnown RBP12.14□□□□□ -0.47
SOX9-201ENST00000245479 FSTL1Q12841 308 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 KPNB1Q14974 876 aaKnown RBP12.14□□□□□ -0.47
SOX9-201ENST00000245479 Q4G0T1 1027 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 PPP6R3Q5H9R7 873 aaPredicted RBP12.14□□□□□ -0.47
SOX9-201ENST00000245479 NLRP9Q7RTR0 991 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 DAW1Q8N136 415 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 PPP4R1Q8TF05 950 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 BSNDQ8WZ55 320 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 RBM15Q96T37 977 aaKnown RBP eCLIP12.14□□□□□ -0.472e-7■■■□□ 17.7
SOX9-201ENST00000245479 IDI2Q9BXS1 227 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms