RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 TSHZ1Q6ZSZ6 1077 aa23.27■■□□□ 1.31
RNF39-201ENST00000244360 DCLK3Q9C098 648 aa23.27■■□□□ 1.31
RNF39-201ENST00000244360 TP73O15350 636 aa23.26■■□□□ 1.31
RNF39-201ENST00000244360 RARGP13631 454 aa23.26■■□□□ 1.31
RNF39-201ENST00000244360 PTK6Q13882 451 aa23.26■■□□□ 1.31
RNF39-201ENST00000244360 QPCTQ16769 361 aa23.26■■□□□ 1.31
RNF39-201ENST00000244360 DUOXA2Q1HG44 320 aa23.26■■□□□ 1.31
RNF39-201ENST00000244360 Q3C1V9 767 aa23.26■■□□□ 1.31
RNF39-201ENST00000244360 MMP19Q99542 508 aa23.26■■□□□ 1.31
RNF39-201ENST00000244360 CHST7Q9NS84 486 aa23.26■■□□□ 1.31
RNF39-201ENST00000244360 PARVAQ9NVD7 372 aa23.26■■□□□ 1.31
RNF39-201ENST00000244360 LOC102724159A0A0B4J2E5 919 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 RGS16O15492 202 aaPredicted RBP23.25■■□□□ 1.31
RNF39-201ENST00000244360 HOXC6P09630 235 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 DRD4P21917 467 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 TAS2R40P59535 323 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 MYL6P60660 151 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 KRT17Q04695 432 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 KCTD2Q14681 263 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 PWP2Q15269 919 aaKnown RBP23.25■■□□□ 1.31
RNF39-201ENST00000244360 PPP1R7Q15435 360 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 SGSM1Q2NKQ1 1148 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 MPZL3Q6UWV2 235 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 SPATA33Q96N06 139 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 SEMA4AQ9H3S1 761 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 FZD8Q9H461 694 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 UTRNP46939 3433 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 ZNF568Q3ZCX4 644 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 LACTB2Q53H82 288 aaPredicted RBP23.25■■□□□ 1.31
RNF39-201ENST00000244360 FEZF2Q8TBJ5 459 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 HOMER3Q9NSC5 361 aa23.25■■□□□ 1.31
RNF39-201ENST00000244360 O00370 1275 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 ACKR2O00590 384 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 GHRP10912 638 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 RHBDF2Q6PJF5 856 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 FBXO16Q8IX29 292 aaPredicted RBP23.24■■□□□ 1.31
RNF39-201ENST00000244360 DHX37Q8IY37 1157 aaKnown RBP23.24■■□□□ 1.31
RNF39-201ENST00000244360 GRK7Q8WTQ7 553 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 CDCA5Q96FF9 252 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 TCRBV5S1A1TA0A578 114 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 TLR3O15455 904 aaKnown RBP23.24■■□□□ 1.31
RNF39-201ENST00000244360 SSTR3P32745 418 aaPredicted RBP23.24■■□□□ 1.31
RNF39-201ENST00000244360 MNAT1P51948 309 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 CALCOCO2Q13137 446 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 TFDP1Q14186 410 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 SLC29A2Q14542 456 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 EXD1Q8NHP7 514 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 ATG4AQ8WYN0 398 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 SMARCAD1Q9H4L7 1026 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 MROH8Q9H579 483 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 CISHQ9NSE2 258 aa23.24■■□□□ 1.31
RNF39-201ENST00000244360 RIPK2O43353 540 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 B4GALT4O60513 344 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 RALAP11233 206 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 IVDP26440 423 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 LLGL1Q15334 1064 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 ANKRD20A8PQ5CZ79 823 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 DAB2IPQ5VWQ8 1189 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 MOB2Q70IA6 237 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 CCDC114Q96M63 670 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 XYLT2Q9H1B5 865 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 KDM4CQ9H3R0 1056 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 IP6K2Q9UHH9 426 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 CALB1P05937 261 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 CHN1P15882 459 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 ITIH2P19823 946 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 OSBPP22059 807 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 CDH5P33151 784 aaPredicted RBP23.23■■□□□ 1.31
RNF39-201ENST00000244360 SNX1Q13596 522 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 ATF7IP2Q5U623 682 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 GPAT2Q6NUI2 795 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 RHPN2Q8IUC4 686 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 OSBPL7Q9BZF2 842 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 ZNF518BQ9C0D4 1074 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 CCDC134Q9H6E4 229 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 R3HDM2Q9Y2K5 976 aaKnown RBP23.23■■□□□ 1.31
RNF39-201ENST00000244360 NEU2Q9Y3R4 380 aa23.23■■□□□ 1.31
RNF39-201ENST00000244360 TMEM191CA6NGB0 347 aa23.22■■□□□ 1.31
RNF39-201ENST00000244360 ASAP2O43150 1006 aa23.22■■□□□ 1.31
RNF39-201ENST00000244360 HBP1O60381 514 aa23.22■■□□□ 1.31
RNF39-201ENST00000244360 RASSF9O75901 435 aa23.22■■□□□ 1.31
RNF39-201ENST00000244360 TMEM191BP0C7N4 346 aa23.22■■□□□ 1.31
RNF39-201ENST00000244360 NF2P35240 595 aa23.22■■□□□ 1.31
RNF39-201ENST00000244360 TRMT10CQ7L0Y3 403 aaKnown RBP23.22■■□□□ 1.31
RNF39-201ENST00000244360 FASTKD5Q7L8L6 764 aaKnown RBP23.22■■□□□ 1.31
RNF39-201ENST00000244360 ANKS4BQ8N8V4 417 aa23.22■■□□□ 1.31
RNF39-201ENST00000244360 SNF8Q96H20 258 aa23.22■■□□□ 1.31
RNF39-201ENST00000244360 SELENOSQ9BQE4 189 aa23.22■■□□□ 1.31
RNF39-201ENST00000244360 OSBPL8Q9BZF1 889 aa23.22■■□□□ 1.31
RNF39-201ENST00000244360 ROPN1BQ9BZX4 212 aaPredicted RBP23.22■■□□□ 1.31
RNF39-201ENST00000244360 ROPN1Q9HAT0 212 aaPredicted RBP23.22■■□□□ 1.31
RNF39-201ENST00000244360 AAASQ9NRG9 546 aa23.22■■□□□ 1.31
RNF39-201ENST00000244360 PCDHGC3Q9UN70 934 aa23.22■■□□□ 1.31
RNF39-201ENST00000244360 GAS8O95995 478 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 ASPAP45381 313 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 CCNG2Q16589 344 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 UBAP2Q5T6F2 1119 aaKnown RBP23.21■■□□□ 1.31
RNF39-201ENST00000244360 TAOK1Q7L7X3 1001 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 ATL2Q8NHH9 583 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 TRAPPC12Q8WVT3 735 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms