RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 CENPTQ96BT3 561 aa17.85■□□□□ 0.45
SSPN-201ENST00000242729 C12orf65Q9H3J6 166 aaKnown RBP17.85■□□□□ 0.45
SSPN-201ENST00000242729 SRRM3A6NNA2 597 aaPredicted RBP17.84■□□□□ 0.45
SSPN-201ENST00000242729 OATP04181 439 aa17.84■□□□□ 0.45
SSPN-201ENST00000242729 ZNF252P-AS1Q0IIN9 211 aa17.84■□□□□ 0.45
SSPN-201ENST00000242729 SCYL3Q8IZE3 742 aa17.84■□□□□ 0.45
SSPN-201ENST00000242729 TMEM174Q8WUU8 243 aa17.84■□□□□ 0.45
SSPN-201ENST00000242729 TGS1Q96RS0 853 aaKnown RBP17.84■□□□□ 0.45
SSPN-201ENST00000242729 STK38LQ9Y2H1 464 aa17.84■□□□□ 0.45
SSPN-201ENST00000242729 RASA4BC9J798 803 aa17.84■□□□□ 0.45
SSPN-201ENST00000242729 RASA4O43374 803 aa17.84■□□□□ 0.45
SSPN-201ENST00000242729 GBP1P32455 592 aa17.84■□□□□ 0.45
SSPN-201ENST00000242729 GHRHRQ02643 423 aa17.84■□□□□ 0.45
SSPN-201ENST00000242729 CAPSQ13938 189 aa17.84■□□□□ 0.45
SSPN-201ENST00000242729 LY6KQ17RY6 165 aa17.84■□□□□ 0.45
SSPN-201ENST00000242729 TMEM132AQ24JP5 1023 aa17.84■□□□□ 0.45
SSPN-201ENST00000242729 PRPF31Q8WWY3 499 aaKnown RBP17.84■□□□□ 0.45
SSPN-201ENST00000242729 ACAD9Q9H845 621 aa17.84■□□□□ 0.45
SSPN-201ENST00000242729 ACTR5Q9H9F9 607 aaPredicted RBP17.84■□□□□ 0.45
SSPN-201ENST00000242729 VPS37BQ9H9H4 285 aa17.84■□□□□ 0.45
SSPN-201ENST00000242729 FER1L6Q2WGJ9 1857 aa17.83■□□□□ 0.45
SSPN-201ENST00000242729 A8MUI8 341 aa17.83■□□□□ 0.45
SSPN-201ENST00000242729 NFKBIEO00221 500 aa17.83■□□□□ 0.45
SSPN-201ENST00000242729 SNX3O60493 162 aa17.83■□□□□ 0.45
SSPN-201ENST00000242729 ITGBL1O95965 494 aaPredicted RBP17.83■□□□□ 0.45
SSPN-201ENST00000242729 KRT19P08727 400 aa17.83■□□□□ 0.45
SSPN-201ENST00000242729 GNPTABQ3T906 1256 aa17.83■□□□□ 0.45
SSPN-201ENST00000242729 TMEM63BQ5T3F8 832 aa17.83■□□□□ 0.45
SSPN-201ENST00000242729 TEX2Q8IWB9 1127 aa17.83■□□□□ 0.45
SSPN-201ENST00000242729 EMC1Q8N766 993 aa17.83■□□□□ 0.45
SSPN-201ENST00000242729 FEZF2Q8TBJ5 459 aa17.83■□□□□ 0.45
SSPN-201ENST00000242729 RMDN2Q96LZ7 410 aa17.83■□□□□ 0.45
SSPN-201ENST00000242729 TEX13BQ9BXU2 312 aa17.83■□□□□ 0.45
SSPN-201ENST00000242729 PIM2Q9P1W9 311 aa17.83■□□□□ 0.45
SSPN-201ENST00000242729 GGA2Q9UJY4 613 aa17.83■□□□□ 0.45
SSPN-201ENST00000242729 CD19P15391 556 aa17.83■□□□□ 0.44
SSPN-201ENST00000242729 PECAM1P16284 738 aaPredicted RBP17.83■□□□□ 0.44
SSPN-201ENST00000242729 MAGEA4P43358 317 aa17.83■□□□□ 0.44
SSPN-201ENST00000242729 CDH8P55286 799 aa17.83■□□□□ 0.44
SSPN-201ENST00000242729 ZNF568Q3ZCX4 644 aa17.83■□□□□ 0.44
SSPN-201ENST00000242729 GPAT2Q6NUI2 795 aa17.83■□□□□ 0.44
SSPN-201ENST00000242729 ENOSF1Q7L5Y1 443 aa17.83■□□□□ 0.44
SSPN-201ENST00000242729 LRRN4Q8WUT4 740 aa17.83■□□□□ 0.44
SSPN-201ENST00000242729 TFAP2BQ92481 460 aa17.83■□□□□ 0.44
SSPN-201ENST00000242729 PRCCQ92733 491 aaPredicted RBP17.83■□□□□ 0.44
SSPN-201ENST00000242729 STMN4Q9H169 189 aaPredicted RBP17.83■□□□□ 0.44
SSPN-201ENST00000242729 PORCNQ9H237 461 aa17.83■□□□□ 0.44
SSPN-201ENST00000242729 AVENQ9NQS1 362 aaPredicted RBP17.83■□□□□ 0.44
SSPN-201ENST00000242729 SPATA31C2B4DYI2 1134 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 SGK1O00141 431 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 HMGB2P26583 209 aaKnown RBP17.82■□□□□ 0.44
SSPN-201ENST00000242729 SNCBQ16143 134 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 ZBED8Q8IZ13 594 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 GRK7Q8WTQ7 553 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 C17orf75Q9HAS0 396 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 PCSK1NQ9UHG2 260 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 POLIQ9UNA4 740 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 EXOC1LA0A1B0GW35 172 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 ASAP2O43150 1006 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 SLC1A1P43005 524 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 PTP4A2Q12974 167 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 EFTUD2Q15029 972 aaKnown RBP eCLIP17.82■□□□□ 0.44
SSPN-201ENST00000242729 TNFAIP8L3Q5GJ75 292 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 TREML2Q5T2D2 321 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 ARMC9Q7Z3E5 817 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 C3orf20Q8ND61 904 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 SGSM3Q96HU1 749 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 SERPINB12Q96P63 405 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 SENP7Q9BQF6 1050 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 KDM4CQ9H3R0 1056 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 SLCO1B3Q9NPD5 702 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 NEU2Q9Y3R4 380 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 AFG3L2Q9Y4W6 797 aa17.82■□□□□ 0.44
SSPN-201ENST00000242729 LOXHD1Q8IVV2 1947 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 WDR91A4D1P6 747 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 FOXN2P32314 431 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 RDXP35241 583 aaKnown RBP17.81■□□□□ 0.44
SSPN-201ENST00000242729 BPIFB4P59827 614 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 ELF3P78545 371 aaPredicted RBP17.81■□□□□ 0.44
SSPN-201ENST00000242729 DNAJC3Q13217 504 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 ZNF772Q68DY9 489 aaPredicted RBP17.81■□□□□ 0.44
SSPN-201ENST00000242729 MFSD5Q6N075 450 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 TMEM192Q8IY95 271 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 KIRREL3Q8IZU9 778 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 CCDC63Q8NA47 563 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 PCYT2Q99447 389 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 KLF6Q99612 283 aaPredicted RBP17.81■□□□□ 0.44
SSPN-201ENST00000242729 MRPL47Q9HD33 250 aaKnown RBP17.81■□□□□ 0.44
SSPN-201ENST00000242729 L3MBTL1Q9Y468 752 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 CNTNAP2Q9UHC6 1331 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 A0A0B4J269 797 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 SPDYE16A6NNV3 312 aaPredicted RBP17.81■□□□□ 0.44
SSPN-201ENST00000242729 GOLGA8RI6L899 631 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 B4GALT5O43286 388 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 PGK2P07205 417 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 POTEJP0CG39 1038 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 UBA1P22314 1058 aaKnown RBP17.81■□□□□ 0.44
SSPN-201ENST00000242729 MYH9P35579 1960 aaKnown RBP17.81■□□□□ 0.44
SSPN-201ENST00000242729 STXBP2Q15833 593 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 DNAJC24Q6P3W2 148 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms