RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 IZUMO3Q5VZ72 239 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 THTPAQ9BU02 230 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 ETNK1Q9HBU6 452 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 GJB4Q9NTQ9 266 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 EHD2Q9NZN4 543 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 BIVM-ERCC5R4GMW8 1640 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 ABCC10Q5T3U5 1492 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 EVPLLA8MZ36 301 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 CYP2B6P20813 491 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 GRK2P25098 689 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 RAB14P61106 215 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 POLD3Q15054 466 aaPredicted RBP13.81□□□□□ -0.2
NEK9-201ENST00000238616 UNC13DQ70J99 1090 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 CLYBLQ8N0X4 340 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 C18orf8Q96DM3 657 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 CINPQ9BW66 212 aaPredicted RBP13.81□□□□□ -0.2
NEK9-201ENST00000238616 EXO5Q9H790 373 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 LIMA1Q9UHB6 759 aaKnown RBP13.81□□□□□ -0.2
NEK9-201ENST00000238616 IQCA1LA6NCM1 817 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 POU4F1Q01851 419 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 P3H1Q32P28 736 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 NSUN7Q8NE18 718 aaKnown RBP13.8□□□□□ -0.2
NEK9-201ENST00000238616 GID8Q9NWU2 228 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 FGFR1P11362 822 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 CAMK2GQ13555 558 aaPredicted RBP13.8□□□□□ -0.2
NEK9-201ENST00000238616 SNX17Q15036 470 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 MED15Q96RN5 788 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 DNMT1P26358 1616 aaKnown RBP13.8□□□□□ -0.2
NEK9-201ENST00000238616 EEF2KO00418 725 aaKnown RBP13.8□□□□□ -0.2
NEK9-201ENST00000238616 TRIM13O60858 407 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 PTPN7P35236 360 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 OLFML2BQ68BL8 750 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 TNIP2Q8NFZ5 429 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 KAT2BQ92831 832 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 SPRTNQ9H040 489 aaPredicted RBP13.8□□□□□ -0.2
NEK9-201ENST00000238616 NAGPAQ9UK23 515 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 CCNE1P24864 410 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 BBS7Q8IWZ6 715 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 DHX40Q8IX18 779 aaKnown RBP13.8□□□□□ -0.2
NEK9-201ENST00000238616 CYFIP2Q96F07 1278 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.8□□□□□ -0.2
NEK9-201ENST00000238616 RNASEH1O60930 286 aaKnown RBP13.8□□□□□ -0.2
NEK9-201ENST00000238616 SFNP31947 248 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 NFIL3Q16649 462 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 ESYT3A0FGR9 886 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 CCDC22O60826 627 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 PCDH8O95206 1070 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 PARNO95453 639 aaKnown RBP13.8□□□□□ -0.2
NEK9-201ENST00000238616 TRADDQ15628 312 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 SLFNL1Q499Z3 407 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 CCDC149Q6ZUS6 474 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 SERAC1Q96JX3 654 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 BSDC1Q9NW68 430 aaPredicted RBP13.8□□□□□ -0.2
NEK9-201ENST00000238616 STOML1Q9UBI4 398 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 HDAC6Q9UBN7 1215 aa13.8□□□□□ -0.2
NEK9-201ENST00000238616 HSMCR30P0CW71 290 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 NOS3P29474 1203 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 RD3Q7Z3Z2 195 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 ASS1P00966 412 aaKnown RBP13.79□□□□□ -0.2
NEK9-201ENST00000238616 KRT76Q01546 638 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 HIST2H2ACQ16777 129 aaPredicted RBP13.79□□□□□ -0.2
NEK9-201ENST00000238616 HIST2H2AA3Q6FI13 130 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 UNC5CLQ8IV45 518 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 MRPL39Q9NYK5 338 aaKnown RBP13.79□□□□□ -0.2
NEK9-201ENST00000238616 POLG2Q9UHN1 485 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 CRLS1Q9UJA2 301 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 TRAPPC8Q9Y2L5 1435 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 CYP26A1O43174 497 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 PEX1O43933 1283 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 TRIM49P0CI25 452 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 TRIM49CP0CI26 452 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 ITGA4P13612 1032 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 TAP1Q03518 808 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 EN1Q05925 392 aaPredicted RBP13.79□□□□□ -0.2
NEK9-201ENST00000238616 CNTN1Q12860 1018 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 IPCEF1Q8WWN9 437 aaPredicted RBP13.79□□□□□ -0.2
NEK9-201ENST00000238616 RAD54LQ92698 747 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 MFSD1Q9H3U5 465 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 WWOXQ9NZC7 414 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 FAM135BQ49AJ0 1406 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 H2AFYO75367 372 aaKnown RBP13.79□□□□□ -0.2
NEK9-201ENST00000238616 CATSPERBQ9H7T0 1116 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 E9PBE3 544 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 DEAF1O75398 565 aaPredicted RBP13.79□□□□□ -0.2
NEK9-201ENST00000238616 PPP2R2AP63151 447 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 ACTN3Q08043 901 aaPredicted RBP13.79□□□□□ -0.2
NEK9-201ENST00000238616 AP3B2Q13367 1082 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 OSBP2Q969R2 916 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 MRPS26Q9BYN8 205 aaKnown RBP13.79□□□□□ -0.2
NEK9-201ENST00000238616 LCMT1Q9UIC8 334 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 VCLP18206 1134 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 CAPRIN2Q6IMN6 1127 aaKnown RBP13.79□□□□□ -0.2
NEK9-201ENST00000238616 SLC25A24Q6NUK1 477 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 SHCBP1LQ9BZQ2 653 aa13.79□□□□□ -0.2
NEK9-201ENST00000238616 ALDH9A1P49189 494 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 ZFYVE28Q9HCC9 887 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 HEATR9A2RTY3 570 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 GMNCA6NCL1 334 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 PSMD12O00232 456 aaPredicted RBP13.78□□□□□ -0.2
NEK9-201ENST00000238616 YY1P25490 414 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms