RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 EDRF1Q3B7T1 1238 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 SLC13A5Q86YT5 568 aaPredicted RBP13.48□□□□□ -0.25
VAMP4-201ENST00000236192 CHID1Q9BWS9 393 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 PCP4L1A6NKN8 68 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 ATP9BO43861 1147 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 HOXC9P31274 260 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 ARSEP51690 589 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 AQP5P55064 265 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 IFNL2Q8IZJ0 200 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 SCFD2Q8WU76 684 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 ITPKCQ96DU7 683 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 SLC24A2Q9UI40 661 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 FBP2O00757 339 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 RRP1BQ14684 758 aaKnown RBP13.48□□□□□ -0.25
VAMP4-201ENST00000236192 PDK4Q16654 411 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 DPY19L2Q6NUT2 758 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 NIPAL1Q6NVV3 410 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 FRMD5Q7Z6J6 570 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 ULK2Q8IYT8 1036 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 RTKN2Q8IZC4 609 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 TUBGCP3Q96CW5 907 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 EBF3Q9H4W6 596 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 RAB26Q9ULW5 256 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 AP4B1Q9Y6B7 739 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 ATP7BP35670 1465 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 POLR2MP0CAP2 368 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 TRIM49P0CI25 452 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 TRIM49CP0CI26 452 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 GNAZP19086 355 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 FLT3P36888 993 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 CENPCQ03188 943 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 COASYQ13057 564 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 PTK7Q13308 1070 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 PABPC4Q13310 644 aaKnown RBP eCLIP13.47□□□□□ -0.251e-6■□□□□ 9.5
VAMP4-201ENST00000236192 MORF4L2Q15014 288 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 LRRC24Q50LG9 513 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 FBXO31Q5XUX0 539 aaPredicted RBP13.47□□□□□ -0.25
VAMP4-201ENST00000236192 ELMSAN1Q6PJG2 1045 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 DEFB107AQ8IZN7 70 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 RAD54LQ92698 747 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 MAGED4Q96JG8 741 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 NSMCE3Q96MG7 304 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 FAM111AQ96PZ2 611 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 S100A14Q9HCY8 104 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 C20orf96Q9NUD7 363 aaPredicted RBP13.47□□□□□ -0.25
VAMP4-201ENST00000236192 PLK2Q9NYY3 685 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 SESN1Q9Y6P5 492 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 UBE4BO95155 1302 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 H7C0C1 242 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 CLIC2O15247 247 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 STAM2O75886 525 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 ZBTB11O95625 1053 aaPredicted RBP13.47□□□□□ -0.25
VAMP4-201ENST00000236192 ATP5OP48047 213 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 RAB14P61106 215 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 SULT2A1Q06520 285 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 CEP78Q5JTW2 689 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 PERM1Q5SV97 790 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 BNC2Q6ZN30 1099 aaPredicted RBP13.47□□□□□ -0.25
VAMP4-201ENST00000236192 RFX6Q8HWS3 928 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 FNIP1Q8TF40 1166 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 SEPT1Q8WYJ6 367 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 KLF6Q99612 283 aaPredicted RBP13.47□□□□□ -0.25
VAMP4-201ENST00000236192 ARMCX1Q9P291 453 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 SUGT1Q9Y2Z0 365 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 HNRNPCL2B2RXH8 293 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 MAGEC1O60732 1142 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 ATXN3P54252 364 aaPredicted RBP13.47□□□□□ -0.25
VAMP4-201ENST00000236192 DRG2P55039 364 aaKnown RBP13.47□□□□□ -0.25
VAMP4-201ENST00000236192 RPS6P62753 249 aaKnown RBP13.47□□□□□ -0.25
VAMP4-201ENST00000236192 GSTO1P78417 241 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 SLC15A2Q16348 729 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 ITPRIPL1Q6GPH6 555 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 S100ZQ8WXG8 99 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 INPP4AQ96PE3 977 aaPredicted RBP13.47□□□□□ -0.25
VAMP4-201ENST00000236192 FAIMQ9NVQ4 179 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 TCHHQ07283 1943 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 ADGRB2O60241 1585 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 SHROOM2Q13796 1616 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 PP2D1A8MPX8 630 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 PHGDHO43175 533 aaKnown RBP13.47□□□□□ -0.25
VAMP4-201ENST00000236192 IL12RB1P42701 662 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 NUDT2P50583 147 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 EVA1CP58658 441 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 EAPPQ56P03 285 aaPredicted RBP13.47□□□□□ -0.25
VAMP4-201ENST00000236192 MFSD5Q6N075 450 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 TMA16Q96EY4 203 aaKnown RBP13.47□□□□□ -0.25
VAMP4-201ENST00000236192 ZSWIM1Q9BR11 485 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 PHF20Q9BVI0 1012 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 INPP5FQ9Y2H2 1132 aa13.47□□□□□ -0.25
VAMP4-201ENST00000236192 GAP43P17677 238 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 SLC12A2P55011 1212 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 MAPK11Q15759 364 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 PPP6R3Q5H9R7 873 aaPredicted RBP13.46□□□□□ -0.25
VAMP4-201ENST00000236192 FAM47AQ5JRC9 791 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 NOP9Q86U38 636 aaKnown RBP13.46□□□□□ -0.25
VAMP4-201ENST00000236192 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.46□□□□□ -0.25
VAMP4-201ENST00000236192 DNAJB4Q9UDY4 337 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 RFX1P22670 979 aa13.46□□□□□ -0.25
VAMP4-201ENST00000236192 TOB1P50616 345 aaPredicted RBP13.46□□□□□ -0.25
VAMP4-201ENST00000236192 RPL26P61254 145 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms