RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 KIF12Q96FN5 646 aa12.48□□□□□ -0.41
TNFAIP1-201ENST00000226225 STK33Q9BYT3 514 aa12.48□□□□□ -0.41
TNFAIP1-201ENST00000226225 HAPLN2Q9GZV7 340 aa12.48□□□□□ -0.41
TNFAIP1-201ENST00000226225 LRRC4CQ9HCJ2 640 aa12.48□□□□□ -0.41
TNFAIP1-201ENST00000226225 A0A087X0T9 212 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 BUB1BO60566 1050 aaPredicted RBP12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 FAM228BP0C875 321 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 EZRP15311 586 aaKnown RBP12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 SKOR1P84550 965 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 APBB1IPQ7Z5R6 666 aaPredicted RBP12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 IQCKQ8N0W5 287 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 PIK3R5Q8WYR1 880 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 BORCS6Q96GS4 357 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 RNF208Q9H0X6 261 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 GANQ9H2C0 597 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 PLCB1Q9NQ66 1216 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 SNTG2Q9NY99 539 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 AJAP1Q9UKB5 411 aaPredicted RBP12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 GMNCA6NCL1 334 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 WEE2P0C1S8 567 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 LLGL1Q15334 1064 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 MARCH8Q5T0T0 291 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 PCSK9Q8NBP7 692 aaKnown RBP12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 TMC2Q8TDI7 906 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 CELF4Q9BZC1 486 aaKnown RBP12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 OSBPL7Q9BZF2 842 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 TPX2Q9ULW0 747 aaKnown RBP12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 MYH11P35749 1972 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 UPP2O95045 317 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 FAM107AO95990 144 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 HSD17B3P37058 310 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 WNT7BP56706 349 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 ZNF699Q32M78 642 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 ACCSLQ4AC99 568 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 ZFYVE27Q5T4F4 411 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 TBC1D1Q86TI0 1168 aaPredicted RBP12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 ZC3H3Q8IXZ2 948 aaKnown RBP12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 EDEM3Q9BZQ6 932 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 CHORDC1Q9UHD1 332 aaPredicted RBP12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 PTCH2Q9Y6C5 1203 aa12.47□□□□□ -0.41
TNFAIP1-201ENST00000226225 TMEM110-MUSTN1A8MSY1 372 aa12.46□□□□□ -0.41
TNFAIP1-201ENST00000226225 KIAA0391O15091 583 aaKnown RBP12.46□□□□□ -0.41
TNFAIP1-201ENST00000226225 GHRP10912 638 aa12.46□□□□□ -0.41
TNFAIP1-201ENST00000226225 MYL6P60660 151 aa12.46□□□□□ -0.41
TNFAIP1-201ENST00000226225 NFIL3Q16649 462 aa12.46□□□□□ -0.41
TNFAIP1-201ENST00000226225 CACNA2D3Q8IZS8 1091 aa12.46□□□□□ -0.41
TNFAIP1-201ENST00000226225 MFSD14AQ96MC6 490 aa12.46□□□□□ -0.41
TNFAIP1-201ENST00000226225 FZD8Q9H461 694 aa12.46□□□□□ -0.41
TNFAIP1-201ENST00000226225 STARD7Q9NQZ5 370 aa12.46□□□□□ -0.41
TNFAIP1-201ENST00000226225 AMACRQ9UHK6 382 aa12.46□□□□□ -0.41
TNFAIP1-201ENST00000226225 FBXL5Q9UKA1 691 aa12.46□□□□□ -0.41
TNFAIP1-201ENST00000226225 ATP8A1Q9Y2Q0 1164 aa12.46□□□□□ -0.41
TNFAIP1-201ENST00000226225 L3MBTL1Q9Y468 752 aa12.46□□□□□ -0.41
TNFAIP1-201ENST00000226225 DAPK3O43293 454 aa12.46□□□□□ -0.42
TNFAIP1-201ENST00000226225 ITGB3P05106 788 aa12.46□□□□□ -0.42
TNFAIP1-201ENST00000226225 PDE6CP51160 858 aa12.46□□□□□ -0.42
TNFAIP1-201ENST00000226225 NOP14P78316 857 aaKnown RBP12.46□□□□□ -0.42
TNFAIP1-201ENST00000226225 PSMD6Q15008 389 aa12.46□□□□□ -0.42
TNFAIP1-201ENST00000226225 TDRD10Q5VZ19 366 aaKnown RBP12.46□□□□□ -0.42
TNFAIP1-201ENST00000226225 NOTUMQ6P988 496 aa12.46□□□□□ -0.42
TNFAIP1-201ENST00000226225 PASD1Q8IV76 773 aa12.46□□□□□ -0.42
TNFAIP1-201ENST00000226225 SEC16BQ96JE7 1060 aa12.46□□□□□ -0.42
TNFAIP1-201ENST00000226225 DEFB118Q96PH6 123 aa12.46□□□□□ -0.42
TNFAIP1-201ENST00000226225 TRMT13Q9NUP7 481 aaKnown RBP12.46□□□□□ -0.42
TNFAIP1-201ENST00000226225 CNOT8Q9UFF9 292 aaKnown RBP12.46□□□□□ -0.42
TNFAIP1-201ENST00000226225 GTPBP10A4D1E9 387 aaKnown RBP12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 LACTBL1A8MY62 500 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 F8VZ95 297 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 MYBL1P10243 752 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 SLCO1A2P46721 670 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 MYO1EQ12965 1108 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 NAIF1Q69YI7 327 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 ZNF571Q7Z3V5 609 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 BRSK2Q8IWQ3 736 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 TMEM130Q8N3G9 435 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 MGARPQ8TDB4 240 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 ZNF516Q92618 1163 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 AGAP1Q9UPQ3 857 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 TNFSF13BQ9Y275 285 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 INPP5FQ9Y2H2 1132 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 BZW2Q9Y6E2 419 aaKnown RBP12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 CDY2AQ9Y6F7 541 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 LOC285556D6RIA3 1793 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 ZNFX1Q9P2E3 1918 aaKnown RBP12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 SSR1P43307 286 aaKnown RBP12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 GDF6Q6KF10 455 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 CTNNBL1Q8WYA6 563 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 CAVIN3Q969G5 261 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 NEUROG2Q9H2A3 272 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 SMIM35A0A1B0GVV1 85 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 KBTBD13C9JR72 458 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 KPNA6O60684 536 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 CST3P01034 146 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 ITGA4P13612 1032 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 ORC1Q13415 861 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 ITGA7Q13683 1181 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 SNX17Q15036 470 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 CRELD2Q6UXH1 353 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 ZNF410Q86VK4 478 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms