RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 ZNF667Q5HYK9 610 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 WSCD1Q658N2 575 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.11■□□□□ 0.17
RPA3-201ENST00000223129 LMO3Q8TAP4 145 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 TATDN2Q93075 761 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 MMS19Q96T76 1030 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 VRTNQ9H8Y1 702 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 L1RE1Q9UN81 338 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 LRRC10BA6NIK2 292 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 FSCN2O14926 492 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 SYN3O14994 580 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 PMM2O15305 246 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 P4HA2O15460 535 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 HUS1O60921 280 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 STAU1O95793 577 aaKnown RBP16.1■□□□□ 0.17
RPA3-201ENST00000223129 URODP06132 367 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 ODC1P11926 461 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 IGFBP4P22692 258 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 NOP14P78316 857 aaKnown RBP16.1■□□□□ 0.17
RPA3-201ENST00000223129 PTPN14Q15678 1187 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 SOWAHAQ2M3V2 549 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 VARS2Q5ST30 1063 aaKnown RBP16.1■□□□□ 0.17
RPA3-201ENST00000223129 EHBP1Q8NDI1 1231 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 ANKRD20A12PQ8NF67 263 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 LNX1Q8TBB1 728 aaPredicted RBP16.1■□□□□ 0.17
RPA3-201ENST00000223129 MRPL38Q96DV4 380 aaKnown RBP16.1■□□□□ 0.17
RPA3-201ENST00000223129 IMPG2Q9BZV3 1241 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 LMAN2LQ9H0V9 348 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 MRPL17Q9NRX2 175 aaKnown RBP16.1■□□□□ 0.17
RPA3-201ENST00000223129 ATG2AQ2TAZ0 1938 aa16.1■□□□□ 0.17
RPA3-201ENST00000223129 LILRB3O75022 631 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 RPL17P18621 184 aaKnown RBP16.09■□□□□ 0.17
RPA3-201ENST00000223129 PAX3P23760 479 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 CDH8P55286 799 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 TNNC1P63316 161 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 TPM4P67936 248 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 CETN1Q12798 172 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 SCARA5Q6ZMJ2 495 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 PDCL2Q8N4E4 241 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 MRPL43Q8N983 215 aaKnown RBP16.09■□□□□ 0.17
RPA3-201ENST00000223129 MYLIPQ8WY64 445 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 TAF4BQ92750 862 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 CDX2Q99626 313 aaPredicted RBP16.09■□□□□ 0.17
RPA3-201ENST00000223129 RBSNQ9H1K0 784 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 STK39Q9UEW8 545 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.09■□□□□ 0.17
RPA3-201ENST00000223129 SLC9A1P19634 815 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 RAP1GAPP47736 663 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 APBA1Q02410 837 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 YWHAHQ04917 246 aaPredicted RBP16.09■□□□□ 0.17
RPA3-201ENST00000223129 SMC1AQ14683 1233 aaKnown RBP16.09■□□□□ 0.17
RPA3-201ENST00000223129 PTPROQ16827 1216 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 WDR44Q5JSH3 913 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 ADGRD2Q7Z7M1 963 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 GLYCTKQ8IVS8 523 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 CCDC150Q8NCX0 1101 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 APPL2Q8NEU8 664 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 GUCD1Q96NT3 240 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 MRPL45Q9BRJ2 306 aaKnown RBP16.09■□□□□ 0.17
RPA3-201ENST00000223129 SMYD3Q9H7B4 428 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 NGRNQ9NPE2 291 aaKnown RBP16.09■□□□□ 0.17
RPA3-201ENST00000223129 GCNT4Q9P109 453 aa16.09■□□□□ 0.17
RPA3-201ENST00000223129 C2orf71A6NGG8 1288 aa16.08■□□□□ 0.16
RPA3-201ENST00000223129 HCRTO43612 131 aa16.08■□□□□ 0.16
RPA3-201ENST00000223129 CYP11A1P05108 521 aa16.08■□□□□ 0.16
RPA3-201ENST00000223129 TPM2P07951 284 aa16.08■□□□□ 0.16
RPA3-201ENST00000223129 TYMPP19971 482 aa16.08■□□□□ 0.16
RPA3-201ENST00000223129 KCNMA1Q12791 1236 aa16.08■□□□□ 0.16
RPA3-201ENST00000223129 MRPL58Q14197 206 aaKnown RBP16.08■□□□□ 0.16
RPA3-201ENST00000223129 OVOS1Q6IE37 1185 aa16.08■□□□□ 0.16
RPA3-201ENST00000223129 RSPO2Q6UXX9 243 aaPredicted RBP16.08■□□□□ 0.16
RPA3-201ENST00000223129 GBP6Q6ZN66 633 aa16.08■□□□□ 0.16
RPA3-201ENST00000223129 RBM23Q86U06 439 aaKnown RBP16.08■□□□□ 0.16
RPA3-201ENST00000223129 TOP6BLQ8N6T0 577 aa16.08■□□□□ 0.16
RPA3-201ENST00000223129 PIK3R5Q8WYR1 880 aa16.08■□□□□ 0.16
RPA3-201ENST00000223129 NAP1L5Q96NT1 182 aaPredicted RBP16.08■□□□□ 0.16
RPA3-201ENST00000223129 INTS2Q9H0H0 1204 aaKnown RBP16.08■□□□□ 0.16
RPA3-201ENST00000223129 SDCBP2Q9H190 292 aa16.08■□□□□ 0.16
RPA3-201ENST00000223129 MTMR10Q9NXD2 777 aa16.08■□□□□ 0.16
RPA3-201ENST00000223129 MTCH2Q9Y6C9 303 aa16.08■□□□□ 0.16
RPA3-201ENST00000223129 EYSQ5T1H1 3165 aa16.08■□□□□ 0.16
RPA3-201ENST00000223129 PER2O15055 1255 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 CNPP09543 421 aaKnown RBP16.07■□□□□ 0.16
RPA3-201ENST00000223129 WEE2P0C1S8 567 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 ASPAP45381 313 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 BMS1Q14692 1282 aaKnown RBP16.07■□□□□ 0.16
RPA3-201ENST00000223129 PSMD5Q16401 504 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 PTPN21Q16825 1174 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 EXOC3L4Q17RC7 722 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 ANKS3Q6ZW76 656 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 LIMS2Q7Z4I7 341 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 OSTM1Q86WC4 334 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 METTL23Q86XA0 190 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 ADGRF2Q8IZF7 708 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 KBTBD7Q8WVZ9 684 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 GAS2L1Q99501 681 aaPredicted RBP16.07■□□□□ 0.16
RPA3-201ENST00000223129 IRAK3Q9Y616 596 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 REV3LO60673 3130 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 TSC2P49815 1807 aa16.07■□□□□ 0.16
RPA3-201ENST00000223129 ADAM12O43184 909 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms