RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 RALAP11233 206 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 CD58P19256 250 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 COILP38432 576 aaPredicted RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 MAGEA4P43358 317 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 TRPC1P48995 793 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 PEX5P50542 639 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 GALCP54803 685 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 ACAP1Q15027 740 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 AARS2Q5JTZ9 985 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 KLHDC7AQ5VTJ3 777 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 LRRC8EQ6NSJ5 796 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 PLD3Q8IV08 490 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 SLC22A9Q8IVM8 553 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 INPP5DQ92835 1189 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 CRAMP1Q96RY5 1269 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 NPHS2Q9NP85 383 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 NGRNQ9NPE2 291 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 DIABLOQ9NR28 239 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 DCTN4Q9UJW0 460 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 FLT1P17948 1338 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 MAPK1P28482 360 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 SERPINB1P30740 379 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 PLA2G4AP47712 749 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 EPHB1P54762 984 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 SKOR1P84550 965 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 ITGA9Q13797 1035 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 MAPRE1Q15691 268 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 PTPROQ16827 1216 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 TMEM259Q4ZIN3 620 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 XKR3Q5GH77 459 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 SLC10A5Q5PT55 438 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 DLG3Q92796 817 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 NSUN4Q96CB9 384 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 ZIM3Q96PE6 472 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 TRAPPC9Q96Q05 1148 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 CEP44Q9C0F1 390 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 MAF1Q9H063 256 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 PALMDQ9NP74 551 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 KBTBD4Q9NVX7 518 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 C19orf81C9J6K1 198 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 H0Y3Z8 333 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 GLRA3O75311 464 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 PCSK2P16519 638 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 TGM2P21980 687 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 SKIV2L2P42285 1042 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 PTENP60484 403 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 PRAMEP78395 509 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 RBBP7Q16576 425 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 Q4G0T1 1027 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 BOLA3Q53S33 107 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 REXO1L1PQ8IX06 675 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 MREGQ8N565 214 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 OXER1Q8TDS5 423 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 ULK4Q96C45 1275 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 MRPL48Q96GC5 212 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 CNBD2Q96M20 576 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 AIFM3Q96NN9 605 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 YIPF3Q9GZM5 350 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 NEUROG2Q9H2A3 272 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 SYBUQ9NX95 663 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 MTMR4Q9NYA4 1195 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 KCNN4O15554 427 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 TRAPPC3O43617 180 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 ANP32DO95626 131 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 THRAP10827 490 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 RUNX1T1Q06455 604 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 FMR1Q06787 632 aaKnown RBP eCLIP4.61□□□□□ -1.67
CHD9-201ENST00000219084 RIPPLY1Q0D2K3 151 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 FAM83EQ2M2I3 478 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 SPOUT1Q5T280 376 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 PCNX4Q63HM2 1172 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 RWDD4Q6NW29 188 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 ADCK1Q86TW2 530 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 PRPF39Q86UA1 669 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 ZDHHC17Q8IUH5 632 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 GLYCTKQ8IVS8 523 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 C1orf131Q8NDD1 294 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 TRPC4APQ8TEL6 797 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 RAPGEF5Q92565 580 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 ASB2Q96Q27 587 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 BEGAINQ9BUH8 593 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 PRRG3Q9BZD7 231 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 LRFN2Q9ULH4 789 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 CARNS1A5YM72 827 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 ANXA9O76027 345 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 HNRNPH1P31943 449 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 BAG6P46379 1132 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 ANXA11P50995 505 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 SF3B3Q15393 1217 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 PPP6R3Q5H9R7 873 aaPredicted RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 NAPEPLDQ6IQ20 393 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 BARGINQ6ZT62 677 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 RBBP8NLQ8NC74 664 aaPredicted RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 TTC16Q8NEE8 873 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 VPS37AQ8NEZ2 397 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 ERP27Q96DN0 273 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 FUCA2Q9BTY2 467 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 KATNAL1Q9BW62 490 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 MAD2L2Q9UI95 211 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 HEY1Q9Y5J3 304 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms