RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 NEK11Q8NG66 645 aa29.2■■■□□ 2.27
CHMP4B-201ENST00000217402 PLVAPQ9BX97 442 aa29.2■■■□□ 2.27
CHMP4B-201ENST00000217402 UBE2TQ9NPD8 197 aaPredicted RBP29.2■■■□□ 2.27
CHMP4B-201ENST00000217402 PLCB1Q9NQ66 1216 aa29.2■■■□□ 2.27
CHMP4B-201ENST00000217402 TKTP29401 623 aaKnown RBP29.2■■■□□ 2.26
CHMP4B-201ENST00000217402 KRT17Q04695 432 aa29.2■■■□□ 2.26
CHMP4B-201ENST00000217402 ELAVL2Q12926 359 aaKnown RBP29.2■■■□□ 2.26
CHMP4B-201ENST00000217402 CUL2Q13617 745 aa29.2■■■□□ 2.26
CHMP4B-201ENST00000217402 SOWAHAQ2M3V2 549 aa29.2■■■□□ 2.26
CHMP4B-201ENST00000217402 TAS1R1Q7RTX1 841 aa29.2■■■□□ 2.26
CHMP4B-201ENST00000217402 CEP57Q86XR8 500 aa29.2■■■□□ 2.26
CHMP4B-201ENST00000217402 SAMD11Q96NU1 681 aa29.2■■■□□ 2.26
CHMP4B-201ENST00000217402 SDCBP2Q9H190 292 aa29.2■■■□□ 2.26
CHMP4B-201ENST00000217402 ALG13Q9NP73 1137 aaKnown RBP29.2■■■□□ 2.26
CHMP4B-201ENST00000217402 AJAP1Q9UKB5 411 aaPredicted RBP29.2■■■□□ 2.26
CHMP4B-201ENST00000217402 PCDHB8Q9UN66 801 aa29.2■■■□□ 2.26
CHMP4B-201ENST00000217402 WEE2P0C1S8 567 aa29.19■■■□□ 2.26
CHMP4B-201ENST00000217402 CDH8P55286 799 aa29.19■■■□□ 2.26
CHMP4B-201ENST00000217402 WSCD1Q658N2 575 aa29.19■■■□□ 2.26
CHMP4B-201ENST00000217402 PDCL2Q8N4E4 241 aa29.19■■■□□ 2.26
CHMP4B-201ENST00000217402 BCO2Q9BYV7 579 aa29.19■■■□□ 2.26
CHMP4B-201ENST00000217402 GANQ9H2C0 597 aa29.19■■■□□ 2.26
CHMP4B-201ENST00000217402 FHOD1Q9Y613 1164 aa29.19■■■□□ 2.26
CHMP4B-201ENST00000217402 CHD9Q3L8U1 2897 aa29.19■■■□□ 2.26
CHMP4B-201ENST00000217402 TRIOBPQ9H2D6 2365 aa29.18■■■□□ 2.26
CHMP4B-201ENST00000217402 C5orf67F2Z3F1 127 aa29.18■■■□□ 2.26
CHMP4B-201ENST00000217402 NOL4O94818 638 aa29.18■■■□□ 2.26
CHMP4B-201ENST00000217402 ADCY5O95622 1261 aa29.18■■■□□ 2.26
CHMP4B-201ENST00000217402 CD58P19256 250 aa29.18■■■□□ 2.26
CHMP4B-201ENST00000217402 PLCB3Q01970 1234 aa29.18■■■□□ 2.26
CHMP4B-201ENST00000217402 DDX53Q86TM3 631 aaKnown RBP29.18■■■□□ 2.26
CHMP4B-201ENST00000217402 ADGRF2Q8IZF7 708 aa29.18■■■□□ 2.26
CHMP4B-201ENST00000217402 TOP6BLQ8N6T0 577 aa29.18■■■□□ 2.26
CHMP4B-201ENST00000217402 FBXO22Q8NEZ5 403 aa29.18■■■□□ 2.26
CHMP4B-201ENST00000217402 ARNTL2Q8WYA1 636 aa29.18■■■□□ 2.26
CHMP4B-201ENST00000217402 MRPL45Q9BRJ2 306 aaKnown RBP29.18■■■□□ 2.26
CHMP4B-201ENST00000217402 C11orf84Q9BUA3 381 aaPredicted RBP29.18■■■□□ 2.26
CHMP4B-201ENST00000217402 DNAJC12Q9UKB3 198 aa29.18■■■□□ 2.26
CHMP4B-201ENST00000217402 CSPG5O95196 566 aa29.17■■■□□ 2.26
CHMP4B-201ENST00000217402 EFEMP2O95967 443 aa29.17■■■□□ 2.26
CHMP4B-201ENST00000217402 UCHL3P15374 230 aa29.17■■■□□ 2.26
CHMP4B-201ENST00000217402 TRIM21P19474 475 aaKnown RBP29.17■■■□□ 2.26
CHMP4B-201ENST00000217402 TBXAS1P24557 533 aaPredicted RBP29.17■■■□□ 2.26
CHMP4B-201ENST00000217402 MRE11P49959 708 aa29.17■■■□□ 2.26
CHMP4B-201ENST00000217402 GCNT1Q02742 428 aa29.17■■■□□ 2.26
CHMP4B-201ENST00000217402 IQCEQ6IPM2 695 aa29.17■■■□□ 2.26
CHMP4B-201ENST00000217402 VSTM4Q8IW00 320 aa29.17■■■□□ 2.26
CHMP4B-201ENST00000217402 MRFAP1L1Q96HT8 127 aa29.17■■■□□ 2.26
CHMP4B-201ENST00000217402 KREMEN1Q96MU8 473 aa29.17■■■□□ 2.26
CHMP4B-201ENST00000217402 RB1P06400 928 aa29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 POLR2FP61218 127 aaKnown RBP29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 RAPGEF1Q13905 1077 aa29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 ARHGAP44Q17R89 818 aa29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 RTP2Q5QGT7 225 aa29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 RNF168Q8IYW5 571 aaPredicted RBP29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 VPS52Q8N1B4 723 aa29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 ARHGEF37A1IGU5 675 aa29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 SYN3O14994 580 aa29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 SOD2P04179 222 aa29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 FGFR3P22607 806 aa29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 KBTBD7Q8WVZ9 684 aa29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 TTPALQ9BTX7 342 aa29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 HERC2P3Q9BVR0 1158 aa29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 NLRC4Q9NPP4 1024 aa29.16■■■□□ 2.26
CHMP4B-201ENST00000217402 MFAP3P55082 362 aa29.15■■■□□ 2.26
CHMP4B-201ENST00000217402 USP41Q3LFD5 358 aa29.15■■■□□ 2.26
CHMP4B-201ENST00000217402 SPECC1LQ69YQ0 1117 aa29.15■■■□□ 2.26
CHMP4B-201ENST00000217402 KIAA1841Q6NSI8 718 aa29.15■■■□□ 2.26
CHMP4B-201ENST00000217402 DPH6Q7L8W6 267 aa29.15■■■□□ 2.26
CHMP4B-201ENST00000217402 LIMS2Q7Z4I7 341 aa29.15■■■□□ 2.26
CHMP4B-201ENST00000217402 METTL23Q86XA0 190 aa29.15■■■□□ 2.26
CHMP4B-201ENST00000217402 FAXDC2Q96IV6 333 aa29.15■■■□□ 2.26
CHMP4B-201ENST00000217402 CYP3A43Q9HB55 503 aa29.15■■■□□ 2.26
CHMP4B-201ENST00000217402 PUF60Q9UHX1 559 aaKnown RBP29.15■■■□□ 2.26
CHMP4B-201ENST00000217402 DSEQ9UL01 958 aa29.15■■■□□ 2.26
CHMP4B-201ENST00000217402 PLXNA4Q9HCM2 1894 aa29.15■■■□□ 2.26
CHMP4B-201ENST00000217402 TSC2P49815 1807 aa29.15■■■□□ 2.26
CHMP4B-201ENST00000217402 C2CD2LO14523 706 aa29.14■■■□□ 2.26
CHMP4B-201ENST00000217402 CYP11A1P05108 521 aa29.14■■■□□ 2.26
CHMP4B-201ENST00000217402 TYMPP19971 482 aa29.14■■■□□ 2.26
CHMP4B-201ENST00000217402 OVOS1Q6IE37 1185 aa29.14■■■□□ 2.26
CHMP4B-201ENST00000217402 TMC6Q7Z403 805 aa29.14■■■□□ 2.26
CHMP4B-201ENST00000217402 OSTM1Q86WC4 334 aa29.14■■■□□ 2.26
CHMP4B-201ENST00000217402 TMEM86AQ8N2M4 240 aa29.14■■■□□ 2.26
CHMP4B-201ENST00000217402 CISHQ9NSE2 258 aa29.14■■■□□ 2.26
CHMP4B-201ENST00000217402 CHD7Q9P2D1 2997 aa29.14■■■□□ 2.25
CHMP4B-201ENST00000217402 ITIH6Q6UXX5 1313 aa29.14■■■□□ 2.25
CHMP4B-201ENST00000217402 GRM6O15303 877 aa29.13■■■□□ 2.25
CHMP4B-201ENST00000217402 TACC1O75410 805 aa29.13■■■□□ 2.25
CHMP4B-201ENST00000217402 YWHAHQ04917 246 aaPredicted RBP29.13■■■□□ 2.25
CHMP4B-201ENST00000217402 GPM6BQ13491 265 aa29.13■■■□□ 2.25
CHMP4B-201ENST00000217402 VARS2Q5ST30 1063 aaKnown RBP29.13■■■□□ 2.25
CHMP4B-201ENST00000217402 OR6B3Q8NGW1 331 aa29.13■■■□□ 2.25
CHMP4B-201ENST00000217402 SPPL3Q8TCT6 385 aa29.13■■■□□ 2.25
CHMP4B-201ENST00000217402 POF1BQ8WVV4 589 aa29.13■■■□□ 2.25
CHMP4B-201ENST00000217402 RIN2Q8WYP3 895 aaPredicted RBP29.13■■■□□ 2.25
CHMP4B-201ENST00000217402 NAA15Q9BXJ9 866 aaKnown RBP29.13■■■□□ 2.25
CHMP4B-201ENST00000217402 SNX25Q9H3E2 840 aa29.13■■■□□ 2.25
CHMP4B-201ENST00000217402 VWA8A3KMH1 1905 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms