RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 SYDE1Q6ZW31 735 aaPredicted RBP21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 GALNT15Q8N3T1 639 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 ENDOVQ8N8Q3 282 aaKnown RBP21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 PTPRN2Q92932 1015 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 CLPTM1LQ96KA5 538 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 MARCOQ9UEW3 520 aaPredicted RBP21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 KAT6AQ92794 2004 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 MTA2O94776 668 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 PGM1P36871 562 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 PPP2R5CQ13362 524 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 BBS9Q3SYG4 887 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 CEP55Q53EZ4 464 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 SLC45A4Q5BKX6 768 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 CFAP157Q5JU67 520 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 SPOPLQ6IQ16 392 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 IRGCQ6NXR0 463 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 ZCCHC9Q8N567 271 aaKnown RBP21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 ANKRD27Q96NW4 1050 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 RAB20Q9NX57 234 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 TCEAL9Q9UHQ7 104 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 PRR12Q9ULL5 1215 aa21.2■□□□□ 0.98
PPP1R3F-201ENST00000055335 H3BRJ5 948 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 SMAPO00193 183 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 TCEA3O75764 348 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 PSMG1O95456 288 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 ENO1P06733 434 aaKnown RBP21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 AMPD1P23109 780 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 CCNG2Q16589 344 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 CLEC16AQ2KHT3 1053 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 TRAPPC3LQ5T215 181 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 PYROXD1Q8WU10 500 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 NSL1Q96IY1 281 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 CCDC17Q96LX7 622 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 TEKT3Q9BXF9 490 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 GINM1Q9NU53 330 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 ACTL7BQ9Y614 415 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 DOT1LQ8TEK3 1739 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 SMCHD1A6NHR9 2005 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 TLR3O15455 904 aaKnown RBP21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 LMNAP02545 664 aaKnown RBP21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 SLC34A1Q06495 639 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 MTMR2Q13614 643 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 FBXL13Q8NEE6 735 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 SLCO2A1Q92959 643 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 TSSK1BQ9BXA7 367 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 MANSC1Q9H8J5 431 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 WDR35Q9P2L0 1181 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 PLIN4Q96Q06 1357 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 POLR2MP0CAP2 368 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 CIITAP33076 1130 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 ABCB5Q2M3G0 1257 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 PRR5LQ6MZQ0 368 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 RHOT1Q8IXI2 618 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 TEKT1Q969V4 418 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 TMEM120AQ9BXJ8 343 aa21.19■□□□□ 0.98
PPP1R3F-201ENST00000055335 KRT1P04264 644 aa21.18■□□□□ 0.98
PPP1R3F-201ENST00000055335 C3orf62Q6ZUJ4 267 aa21.18■□□□□ 0.98
PPP1R3F-201ENST00000055335 RHPN2Q8IUC4 686 aa21.18■□□□□ 0.98
PPP1R3F-201ENST00000055335 HELQQ8TDG4 1101 aa21.18■□□□□ 0.98
PPP1R3F-201ENST00000055335 BICD1Q96G01 975 aa21.18■□□□□ 0.98
PPP1R3F-201ENST00000055335 PSMC3IPQ9P2W1 217 aaPredicted RBP21.18■□□□□ 0.98
PPP1R3F-201ENST00000055335 C2CD2LO14523 706 aa21.18■□□□□ 0.98
PPP1R3F-201ENST00000055335 ECE1P42892 770 aa21.18■□□□□ 0.98
PPP1R3F-201ENST00000055335 FOXB2Q5VYV0 432 aa21.18■□□□□ 0.98
PPP1R3F-201ENST00000055335 PLA2G4FQ68DD2 849 aa21.18■□□□□ 0.98
PPP1R3F-201ENST00000055335 SIAH1Q8IUQ4 282 aa21.18■□□□□ 0.98
PPP1R3F-201ENST00000055335 PALM2Q8IXS6 379 aa21.18■□□□□ 0.98
PPP1R3F-201ENST00000055335 FAM111AQ96PZ2 611 aa21.18■□□□□ 0.98
PPP1R3F-201ENST00000055335 ZNF219Q9P2Y4 722 aaPredicted RBP21.18■□□□□ 0.98
PPP1R3F-201ENST00000055335 B2RBV5 119 aa21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 USP1O94782 785 aa21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 RTN3O95197 1032 aaPredicted RBP21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 LBRQ14739 615 aaKnown RBP21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 CENPUQ71F23 418 aa21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 SV2AQ7L0J3 742 aa21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 TAS2R1Q9NYW7 299 aa21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 CCDC195A0A1B0GUA6 201 aa21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 BGNP21810 368 aa21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 OR52E8Q6IFG1 317 aa21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 ARFGEF1Q9Y6D6 1849 aa21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 MYL2P10916 166 aa21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 ADRA2BP18089 450 aa21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 SP4Q02446 784 aa21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 NFX1Q12986 1120 aaKnown RBP21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 HIPK4Q8NE63 616 aa21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 MKL1Q969V6 931 aa21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 CDCA7Q9BWT1 371 aaPredicted RBP21.17■□□□□ 0.98
PPP1R3F-201ENST00000055335 FAM237BA0A1B0GVD1 139 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 BRD2P25440 801 aaKnown RBP21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 CENPCQ03188 943 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 NFIL3Q16649 462 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 MFSD7Q6UXD7 560 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 IZUMO2Q6UXV1 221 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 ALYREFQ86V81 257 aaKnown RBP21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 SLC9A9Q8IVB4 645 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 KBTBD2Q8IY47 623 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 DBNDD1Q9H9R9 158 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 DNALI1O14645 258 aaPredicted RBP21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 MAGEB2O15479 319 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms