RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 TRPC7Q9HCX4 862 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 KLHL11Q9NVR0 708 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 NEURL4Q96JN8 1562 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 SLC2A3P11169 496 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 SERPINB4P48594 390 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 MYBPC2Q14324 1141 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 RUSC1Q9BVN2 902 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 MRPL46Q9H2W6 279 aaKnown RBP24.28■■□□□ 1.48
TARBP1-201ENST00000040877 PSMC3IPQ9P2W1 217 aaPredicted RBP24.28■■□□□ 1.48
TARBP1-201ENST00000040877 GPR182O15218 404 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 WEE2P0C1S8 567 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 ODC1P11926 461 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 C1orf146Q5VVC0 180 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 TTC30AQ86WT1 665 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 FRMD8P1Q9BZ68 369 aaPredicted RBP24.28■■□□□ 1.48
TARBP1-201ENST00000040877 PLAGL2Q9UPG8 496 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 TXNRD3Q86VQ6 643 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 SEPT5Q99719 369 aaPredicted RBP24.27■■□□□ 1.48
TARBP1-201ENST00000040877 ZCCHC17Q9NP64 241 aaKnown RBP24.27■■□□□ 1.48
TARBP1-201ENST00000040877 KBTBD4Q9NVX7 518 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 XPO7Q9UIA9 1087 aaKnown RBP24.27■■□□□ 1.48
TARBP1-201ENST00000040877 HIST1H2AGP0C0S8 130 aaPredicted RBP24.27■■□□□ 1.48
TARBP1-201ENST00000040877 HIST1H2ADP20671 130 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 OR1G1P47890 313 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 AARSP49588 968 aaKnown RBP eCLIP24.27■■□□□ 1.483e-8■■■■■ 82.4
TARBP1-201ENST00000040877 ST13P4Q8IZP2 240 aaPredicted RBP24.27■■□□□ 1.48
TARBP1-201ENST00000040877 DNERQ8NFT8 737 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 SGSM3Q96HU1 749 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 HIST1H2AHQ96KK5 128 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 HIST1H2AJQ99878 128 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 H2AFJQ9BTM1 129 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 CARD9Q9H257 536 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 MLXIPLQ9NP71 852 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 SLC30A1Q9Y6M5 507 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 CFAP73A6NFT4 308 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 GTF2H3Q13889 308 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 ACAD10Q6JQN1 1059 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 ANKMY2Q8IV38 441 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 TBC1D19Q8N5T2 526 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 SLC7A14Q8TBB6 771 aa24.27■■□□□ 1.48
TARBP1-201ENST00000040877 FIGNQ5HY92 759 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 JAMLQ86YT9 394 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 RNF135Q8IUD6 432 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 FBXL16Q8N461 479 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 SPATA18Q8TC71 538 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 TMC2Q8TDI7 906 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 COLEC11Q9BWP8 271 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 ROPN1BQ9BZX4 212 aaPredicted RBP24.26■■□□□ 1.47
TARBP1-201ENST00000040877 KDM4CQ9H3R0 1056 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 ROPN1Q9HAT0 212 aaPredicted RBP24.26■■□□□ 1.47
TARBP1-201ENST00000040877 DPP3Q9NY33 737 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 PCDHGB4Q9UN71 923 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 TNS2Q63HR2 1409 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 NKRFO15226 690 aaKnown RBP eCLIP24.26■■□□□ 1.471e-11■□□□□ 8.1
TARBP1-201ENST00000040877 GFAPP14136 432 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 MPZL3Q6UWV2 235 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 C4orf19Q8IY42 314 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 IRX2Q9BZI1 471 aaPredicted RBP24.26■■□□□ 1.47
TARBP1-201ENST00000040877 AAASQ9NRG9 546 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 MED24O75448 989 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 THEMIS2Q5TEJ8 643 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 CLMNQ96JQ2 1002 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 ITGB3P05106 788 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 POLE2P56282 527 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 MGAT5BQ3V5L5 792 aa24.26■■□□□ 1.47
TARBP1-201ENST00000040877 RIBC1Q8N443 379 aaPredicted RBP24.26■■□□□ 1.47
TARBP1-201ENST00000040877 PABPC5Q96DU9 382 aaKnown RBP24.26■■□□□ 1.47
TARBP1-201ENST00000040877 ZNF185O15231 689 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 KCNA2P16389 499 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 GRIN1Q05586 938 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 DCAF6Q58WW2 860 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 ARHGEF38Q9NXL2 777 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 PCDHB7Q9Y5E2 793 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 HOXA2O43364 376 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 ABCE1P61221 599 aaKnown RBP24.25■■□□□ 1.47
TARBP1-201ENST00000040877 ZNF200P98182 395 aaPredicted RBP24.25■■□□□ 1.47
TARBP1-201ENST00000040877 TMCO4Q5TGY1 634 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 CCNI2Q6ZMN8 369 aaPredicted RBP24.25■■□□□ 1.47
TARBP1-201ENST00000040877 PTPRN2Q92932 1015 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 SH3BP1Q9Y3L3 701 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 SPRP35270 261 aaPredicted RBP24.25■■□□□ 1.47
TARBP1-201ENST00000040877 IL31Q6EBC2 164 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 MS4A14Q96JA4 679 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 AGAP3Q96P47 875 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 KCNF1Q9H3M0 494 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 UBE2Q2LH0YL09 131 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 KPNA6O60684 536 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 RBP3P10745 1247 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 HARS2P49590 506 aaKnown RBP24.25■■□□□ 1.47
TARBP1-201ENST00000040877 RBBP7Q16576 425 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 SZRD1Q7Z422 152 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 LRRC43Q8N309 656 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 FOPNLQ96NB1 174 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 HPSEQ9Y251 543 aa24.25■■□□□ 1.47
TARBP1-201ENST00000040877 VCAM1P19320 739 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 PDAP1Q13442 181 aaKnown RBP24.24■■□□□ 1.47
TARBP1-201ENST00000040877 DDIASQ8IXT1 998 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 USP38Q8NB14 1042 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 HIPK4Q8NE63 616 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 TRIM51Q9BSJ1 452 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms