RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 METTL3Q86U44 580 aaKnown RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 PEX5LQ8IYB4 626 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 PLIN2Q99541 437 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 SLC39A8Q9C0K1 460 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 GOLPH3Q9H4A6 298 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 FKBP14Q9NWM8 211 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 DSEQ9UL01 958 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 CYP2C9P11712 490 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 ACTR2P61160 394 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 CLEC16AQ2KHT3 1053 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 TIGD7Q6NT04 549 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 ASZ1Q8WWH4 475 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 GANQ9H2C0 597 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 RGS18Q9NS28 235 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 TBK1Q9UHD2 729 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 FAM50BQ9Y247 325 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 DRG1Q9Y295 367 aaKnown RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 SAGE2PA6NJ88 616 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 SOAT2O75908 522 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 GNA15P30679 374 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 MTMR1Q13613 665 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 STXBP2Q15833 593 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 PADI6Q6TGC4 694 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 PRR23CQ6ZRP0 262 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 LRRC6Q86X45 466 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 NT5DC4Q86YG4 428 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 GDAP1Q8TB36 358 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 DNAJC9Q8WXX5 260 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 EFCAB1Q9HAE3 211 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 AHSPQ9NZD4 102 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 TARBP1Q13395 1621 aaKnown RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 PER1O15534 1290 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 DGAT1O75907 488 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 GRIK1P39086 918 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 RAB2AP61019 212 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 DCTN2Q13561 401 aaKnown RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 ZNF235Q14590 738 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 NSUN6Q8TEA1 469 aaKnown RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 USP44Q9H0E7 712 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 SMURF2Q9HAU4 748 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 NOVA2Q9UNW9 492 aaKnown RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 LRCH1Q9Y2L9 728 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 PDZK1P1A8MUH7 402 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 MEI4A8MW99 385 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 SH2B2O14492 632 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 TRIM49P0CI25 452 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 TRIM49CP0CI26 452 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 MLNP12872 115 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 RXRAP19793 462 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 PTPN12Q05209 780 aaKnown RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 WDR93Q6P2C0 686 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 FGD2Q7Z6J4 655 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 DYDC2Q96IM9 177 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 CCSER1Q9C0I3 900 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 COA1Q9GZY4 146 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 ILKAPQ9H0C8 392 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 ASCC2Q9H1I8 757 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 PCDHGC5Q9Y5F6 944 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 A0A088AWK7 358 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 ZNF10P21506 573 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 KCNK10P57789 538 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 OLR1P78380 273 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 ZNF200P98182 395 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 TKFCQ3LXA3 575 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 TLK2Q86UE8 772 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 CCDC103Q8IW40 242 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 ACOT12Q8WYK0 555 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 PTPRN2Q92932 1015 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 Q96MT0 163 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 FBXO28Q9NVF7 368 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 AAR2Q9Y312 384 aaKnown RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 LTN1O94822 1766 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 NEMP1O14524 444 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 NPTXRO95502 500 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 NR3C2P08235 984 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 PABPC1P11940 636 aaKnown RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 ADD2P35612 726 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 MDH1P40925 334 aaKnown RBP6.34□□□□□ -1.39
VPS13D-201ENST00000011700 PRELPP51888 382 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 RAD23BP54727 409 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 INSCQ1MX18 579 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 PTF1AQ7RTS3 328 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 PPP1R14BQ96C90 147 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 BLZF1Q9H2G9 400 aa6.34□□□□□ -1.39
VPS13D-201ENST00000011700 ERVK-7P63135 1459 aa6.34□□□□□ -1.4
VPS13D-201ENST00000011700 ZSCAN9O15535 394 aaPredicted RBP6.34□□□□□ -1.4
VPS13D-201ENST00000011700 TAF5LO75529 589 aa6.34□□□□□ -1.4
VPS13D-201ENST00000011700 F9P00740 461 aa6.34□□□□□ -1.4
VPS13D-201ENST00000011700 KCNA3P22001 575 aa6.34□□□□□ -1.4
VPS13D-201ENST00000011700 GGCXP38435 758 aa6.34□□□□□ -1.4
VPS13D-201ENST00000011700 MAGEA10P43363 369 aaPredicted RBP6.34□□□□□ -1.4
VPS13D-201ENST00000011700 CDK7P50613 346 aa6.34□□□□□ -1.4
VPS13D-201ENST00000011700 GPR162Q16538 588 aa6.34□□□□□ -1.4
VPS13D-201ENST00000011700 CCDC153Q494R4 210 aa6.34□□□□□ -1.4
VPS13D-201ENST00000011700 SHCBP1Q8NEM2 672 aa6.34□□□□□ -1.4
VPS13D-201ENST00000011700 TBCKQ8TEA7 893 aa6.34□□□□□ -1.4
VPS13D-201ENST00000011700 KCNB2Q92953 911 aa6.34□□□□□ -1.4
VPS13D-201ENST00000011700 HES6Q96HZ4 224 aa6.34□□□□□ -1.4
VPS13D-201ENST00000011700 EGFL8Q99944 293 aa6.34□□□□□ -1.4
VPS13D-201ENST00000011700 MAN1B1Q9UKM7 699 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms