RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Rgs22G3UYX5 1258 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Nptx2O70340 429 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 GlulP15105 373 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 SsbP32067 415 aaKnown RBP9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Cfl2P45591 166 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Dok1P97465 482 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Arhgef16Q3U5C8 713 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ell2Q3UKU1 639 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 P2rx3Q3UR32 397 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Carmil2Q3V3V9 1296 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 FntaQ61239 377 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Kank4Q6P9J5 1016 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Olfr1037Q7TR84 321 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ube3cQ80U95 1083 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Alkal2Q80UG6 151 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Naa25Q8BWZ3 972 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 EngaseQ8BX80 734 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 4922502D21RikQ8C634 189 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Zswim3Q8CFL8 695 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ces2aQ8QZR3 558 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Olfr811Q8VFI1 319 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Olfr791Q8VGJ0 312 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Bcas2Q9D287 225 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Tmem8aQ9ESN3 769 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Stk32bQ9JJX8 414 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Hmgn5Q9JL35 406 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Nup153E9Q3G8 1462 aaKnown RBP9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Erbb3Q61526 1339 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Scgb1b10A0A087WPW0 93 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Faap100A2ACJ2 879 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ttll10A4Q9F3 704 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Sec14l1A8Y5H7 715 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ccdc62E9PVD1 701 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 2210016F16RikG3X8U3 338 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Olfr618K7N6B3 318 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Krt1P04104 637 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Lrrc4bP0C192 709 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Kcnj6P48542 425 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Arl4cP61208 192 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 NficP70255 439 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 VcpQ01853 806 aaKnown RBP9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Nek10Q3UGM2 1111 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Znf827Q505G8 1078 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ddx5Q61656 614 aaKnown RBP9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ptger2Q62053 362 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Fnip1Q68FD7 1165 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Usp7Q6A4J8 1103 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Fnbp1Q80TY0 616 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Plin5Q8BVZ1 463 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ttc39bQ8BYY4 617 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Pcdhb19Q91Y01 801 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Pex6Q99LC9 981 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Dsn1Q9CYC5 348 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Cir1Q9DA19 450 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 TrehQ9JLT2 576 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ulk2Q9QY01 1037 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Asic5Q9R0Y1 495 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gm7682A0A0J9YUM1 481 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Prss51A0A286YDY8 319 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 AV320801A2AWL3 467 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Cypt3B1AY64 174 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Pdia2D3Z6P0 527 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Rnf169E9Q7F2 694 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 A430078G23RikE9Q7Y4 484 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Nedd9O35177 833 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 NudcO35685 332 aaKnown RBP9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Zp3P10761 424 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 GsnP13020 780 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 ZfaP23607 742 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Lilrb3P97484 841 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 CbfbQ08024 187 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Rrp36Q3UFY0 244 aaKnown RBP9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Taar7dQ5QD10 358 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 A1cfQ5YD48 595 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 HnrnpdQ60668 355 aaKnown RBP9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Smad2Q62432 467 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Olfr293Q7TS10 336 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Acaa2Q8BWT1 397 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Fbxw19Q8C2W8 466 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 N4bp3Q8C7U1 537 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Nxnl1Q8VC33 217 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gpsm2Q8VDU0 679 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Etfrf1Q91V16 86 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Sf3b5Q923D4 86 aaKnown RBP9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Retreg3Q9CQV4 466 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Kcnj10Q9JM63 379 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Mast2Q60592 1734 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ubr1O70481 1757 aa9.62□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Mmrn1B2RPV6 1210 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Acad12D3Z7X0 555 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Erich1E9PY43 332 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Phldb3E9QAF4 648 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Hps1O08983 704 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Psmc2P46471 433 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Siah1aP61092 282 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Siah1bQ06985 282 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Zmat1Q3V0C1 714 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gal3st4Q3V1B8 480 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Clhc1Q5M6W3 596 aa9.61□□□□□ -0.87
Upf3b-201ENSMUST00000076265 PtprrQ62132 656 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms