RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Myh9Q8VDD5 1960 aaKnown RBP20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Anxa8O35640 327 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Dnajb6O54946 365 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Snx19Q6P4T1 997 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Slc9c1Q6UJY2 1175 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 C2cd5Q7TPS5 1016 aaKnown RBP20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Fbxo28Q8BIG4 368 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Sh3rf3Q8C120 878 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Fam118bQ8C569 351 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Nr3c2Q8VII8 978 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Cttnbp2nlQ99LJ0 638 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Mzf1S4R1L6 814 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Lonrf1D3YY23 762 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Nptx2O70340 429 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Nr3c1P06537 783 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Ets2P15037 468 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 PrkchP23298 683 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Tbc1d10aP58802 500 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Sem1P60897 70 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Nt5dc3Q3UHB1 546 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Gm14685Q52KH6 695 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Slitrk1Q810C1 696 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Pcdha10Q91Y20 946 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Psmd6Q99JI4 389 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Ropn1Q9ESG2 212 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Tk2Q9R088 270 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Gabbr1Q9WV18 960 aa20.1■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Hcls1P49710 486 aaKnown RBP20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 PhbP67778 272 aaKnown RBP20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Vamp7P70280 220 aa20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 FerP70451 823 aa20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 NfibP97863 570 aaKnown RBP20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 AcrbpQ3V140 540 aa20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Hbs1lQ69ZS7 682 aa20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Psd2Q6P1I6 770 aa20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Cpa1Q7TPZ8 419 aa20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Nsun6Q7TS68 476 aa20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Cep72Q9D3R3 646 aa20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 PrameQ9D4Z5 464 aa20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Mrpl2Q9D773 306 aaKnown RBP20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Rbp7Q9EPC5 134 aa20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Slc12a4Q9JIS8 1085 aa20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 PnkpQ9JLV6 522 aaKnown RBP20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Cyth1Q9QX11 398 aa20.09■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Ppp1r36D3Z0R2 411 aa20.08■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 TazI7HJS2 263 aa20.08■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Rab20P35295 233 aa20.08■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Rad54lP70270 747 aa20.08■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Gtpbp10Q8K013 366 aa20.08■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Thoc1Q8R3N6 657 aaKnown RBP20.08■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 DaglbQ91WC9 669 aa20.08■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Rassf3Q99P51 232 aa20.08■□□□□ 0.81
Ccdc50-201ENSMUST00000039443 Tldc2A2ACG1 198 aa20.08■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Itpripl1A2ASA8 547 aa20.08■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 EloblA6PWE0 161 aa20.08■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Grik3B1AS29 919 aa20.08■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Pcdh9F8VPK8 1237 aa20.08■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Rpl21O09167 160 aaKnown RBP20.08■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 GabpaQ00422 454 aa20.08■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Spa17Q62252 149 aa20.08■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Chsy1Q6ZQ11 800 aa20.08■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Q80ZQ3 298 aa20.08■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 AdigQ8R400 80 aa20.08■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 ParvaQ9EPC1 372 aa20.08■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Anapc7Q9WVM3 565 aa20.08■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Eef1bO70251 225 aaKnown RBP20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Tulp2P46686 562 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Pde1bQ01065 535 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 VcpQ01853 806 aaKnown RBP20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Grid1Q61627 1009 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Spata24Q6P926 205 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Snap47Q8R570 413 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Nek8Q91ZR4 698 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Thap12Q9CUX1 758 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Rnf14Q9JI90 485 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Atp6v1c1Q9Z1G3 382 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Ttc7bE9Q6P5 843 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Vmn2r15L7N2A0 855 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Tarbp2P97473 365 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Mark3Q03141 753 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Ripply1Q2WG77 201 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Prr7Q3V0I2 269 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Gm13103Q4VAD2 491 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Slc9b2Q5BKR2 547 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 GnasQ6R0H7 1133 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Uba6Q8C7R4 1053 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Cyp2d26Q8CIM7 500 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Spon1Q8VCC9 807 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Stx18Q8VDS8 334 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Atad3Q925I1 591 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Tnpo2Q99LG2 887 aaKnown RBP20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 HgsQ99LI8 775 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Tm9sf1Q9DBU0 606 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Tsc1Q9EP53 1161 aa20.07■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 StrnO55106 780 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Rag1P15919 1040 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Kcnc2Q14B80 642 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 SpoplQ2M2N2 392 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Mylk3Q3UIZ8 795 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Dsg1aQ61495 1057 aa20.06■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms