RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Cdca7Q9D0M2 382 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Rnf25Q9QZR0 456 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Fam205a1D3YZF6 1314 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Bfsp1A2AMT1 669 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Lrriq4A6H6A4 596 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Gm4846B2RWH8 538 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Lonrf1D3YY23 762 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Pdzrn4E9PUZ9 1014 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Stra6O70491 670 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 PigrO70570 771 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Magea5O89009 320 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Magea8O89012 320 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 AfmO89020 608 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Foxp2P58463 714 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Erbb2P70424 1256 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Ece1Q4PZA2 769 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Xlr3cQ61806 226 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Ripor1Q68FE6 1223 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Gpr101Q80T62 511 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Crybg3Q80W49 1005 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Slitrk1Q810C1 696 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 FsbpQ8BKE5 299 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 DolkQ8R2Y3 534 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Dnajc9Q91WN1 259 aaKnown RBP14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Isl2Q9CXV0 359 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Klf15Q9EPW2 415 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Prdm12A2AJ77 365 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Clrn2B2RVW2 232 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Tekt5G5E8A8 557 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Klf1P46099 358 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Hoxc13P50207 328 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Dnajc5P60904 198 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Mark3Q03141 753 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Plk1Q07832 603 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 4933427I04RikQ3V053 235 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Gm14685Q52KH6 695 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Slc10a5Q5PT54 434 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Mks1Q5SW45 561 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Magea3Q6T340 320 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Rnf139Q7TMV1 668 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Sestd1Q80UK0 696 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Rcn2Q8BP92 320 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Osbpl2Q8BX94 484 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Apol7cQ8C6E1 369 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Haus3Q8QZX2 570 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Plekhg6Q8R0J1 787 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Satl1Q9D5N8 744 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Rnf14Q9JI90 485 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Pdzd4Q9QY39 772 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Col2a1P28481 1487 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Zc3h7aE9PWW6 970 aaKnown RBP14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 TazI7HJS2 263 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Mmp13P33435 472 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 SnrpfP62307 86 aaKnown RBP14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Tarbp2P97473 365 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Gsdmc4Q3TR54 480 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Stip1Q60864 543 aaKnown RBP14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Dsg1aQ61495 1057 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Cyfip1Q7TMB8 1253 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Glra2Q7TNC8 452 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 AmphQ7TQF7 686 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Vat1lQ80TB8 417 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Plcb4Q91UZ1 1175 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Gyg1Q9R062 333 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Sgk1Q9WVC6 431 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 Anapc7Q9WVM3 565 aa14.16□□□□□ -0.14
Nup88-201ENSMUST00000035283 AspgA0JNU3 564 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Prdm11A2AGX3 565 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Fam155bA2BDP1 471 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Ppp1r36D3Z0R2 411 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Xbp1O35426 267 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Csf1rP09581 977 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Mcpt4P21812 246 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Kpnb1P70168 876 aaKnown RBP14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Tff2Q03404 129 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Sox10Q04888 466 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Pdlim7Q3TJD7 457 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Ifnl2Q4VK74 193 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Slc9b2Q5BKR2 547 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Shroom1Q5SX79 823 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Lrif1Q8CDD9 755 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 McmbpQ8R3C0 642 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Tomm20lQ9D4V6 152 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Tmem79Q9D709 391 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 PrccQ9EQC8 491 aaKnown RBP14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Kat2aQ9JHD2 830 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Nupr1Q9WTK0 80 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Gm11985A0A1B0GS61 206 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 P01734 135 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 PrkchP23298 683 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Aimp1P31230 310 aaKnown RBP14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Psmc5P62196 406 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Vamp7P70280 220 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Yy1Q00899 414 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Eepd1Q3TGW2 569 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Q80ZQ3 298 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Pak4Q8BTW9 593 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Pofut2Q8VHI3 429 aa14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 NkapQ9D0F4 415 aaKnown RBP14.15□□□□□ -0.14
Nup88-201ENSMUST00000035283 Cables1Q9ESJ1 568 aa14.15□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms