RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Gm29554A0A087WNW4 188 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 PdgfraP26618 1089 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Slc24a2Q14BI1 711 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Znf746Q3U133 652 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Klra7Q60654 280 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Krt32Q62168 407 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Klhdc10Q6PAR0 439 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Amigo3Q8C2S7 508 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Adgra1Q8C4G9 578 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Rmnd1Q8CI78 450 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Rassf3Q99P51 232 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Fam173bQ9D1Z3 247 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Ankef1Q9D2J7 775 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Polr3cQ9D483 533 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Chmp2aQ9DB34 222 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Sh2b2Q9JID9 621 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Net1Q9Z206 595 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 2210011C24RikA0A087WQ89 206 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Fam171a1A2ATK9 892 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Serpinb3cA2RSF9 386 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Akr1b7P21300 316 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 ItkQ03526 625 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Hipk4Q3V016 616 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 HnrnpdQ60668 355 aaKnown RBP12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Tshz2Q68FE9 1030 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Frmd5Q6P5H6 517 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Ssxb5Q6XAS2 159 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Ckap2lQ7TS74 745 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Mtrf1lQ8BJU9 373 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Daam1Q8BPM0 1077 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Alas1Q8VC19 642 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Snapc2Q91XA5 359 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Barx2O08686 283 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 CflarO35732 481 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Hoxb8P09632 243 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Cyp2j11Q3UNV2 504 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Anapc5Q8BTZ4 740 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 DnerQ8JZM4 737 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Ube2q2Q8K2Z8 378 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Tmco4Q91WU4 631 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Maml3D4QGC2 1135 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Myl1P05977 188 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Msh2P43247 935 aaKnown RBP12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Vps4bP46467 444 aaKnown RBP12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Tdrd5Q5VCS6 1040 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 SnrpaQ62189 287 aaKnown RBP12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Atp4aQ64436 1033 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Armcx2Q6A058 784 aaKnown RBP12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Ephb1Q8CBF3 984 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Hip1Q8VD75 1029 aaKnown RBP12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 ChiaQ91XA9 473 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Cdk9Q99J95 372 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Mrps9Q9D7N3 390 aaKnown RBP12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Plagl1Q9JLQ4 704 aa12.97□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Znf638Q61464 1960 aaKnown RBP12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 AspgA0JNU3 564 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Klhl41A2AUC9 606 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 C1qbpO35658 278 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Prl3b1P09586 222 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Nub1P54729 614 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 FaxcQ3UMF9 409 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Ppfia2Q8BSS9 1257 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Fcho1Q8K285 873 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Onecut3Q8K557 490 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 FtcdQ91XD4 541 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 CtsqQ91ZF4 343 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Polr3eQ9CZT4 710 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Cap1P40124 474 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 GsapQ3TCV3 858 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Klhdc9Q3USL1 350 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Atg9bQ6EBV9 922 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Zcwpw1Q6IR42 630 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 FdpsQ920E5 353 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Abcg3Q99P81 650 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Borcs6Q9D6W8 360 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Hic1Q9R1Y5 733 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Lrp6O88572 1613 aa12.96□□□□□ -0.33
Pdlim5-201ENSMUST00000029941 Stx1bP61264 288 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Rmdn3Q3UJU9 470 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Ccdc50Q810U5 305 aaKnown RBP12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Fbxl13Q8CDU4 790 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Kat5Q8CHK4 513 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Ccdc80Q8R2G6 949 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Olig1Q9JKN5 260 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Mzf1S4R1L6 814 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 RptorQ8K4Q0 1335 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Myh6Q02566 1938 aaKnown RBP12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Znf804aA2AKY4 1200 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Gm4985A2ALC6 410 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Rabgap1A2AWA9 1064 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Mup10A2BIN1 180 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Mup14A2CEK7 180 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Mup19A9C497 187 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Mup15A9R9W0 180 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Mup17B5X0G2 180 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Mup8E9PVW0 235 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Mup7E9QA79 235 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Zfp850J3QPC5 689 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Gm3187M0QWW3 260 aa12.96□□□□□ -0.34
Pdlim5-201ENSMUST00000029941 Mup6P02762 180 aa12.96□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms