RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 P3h2Q8CG71 703 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Trim32Q8CH72 655 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Psmd10Q9Z2X2 231 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Adgrb3Q80ZF8 1522 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Prss51A0A286YDY8 319 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Csn1s1P19228 313 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 4930430A15RikQ05AC5 485 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Zfp454Q80Y34 536 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 MymkQ9D1N4 221 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gcnt4E9Q649 455 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ifi206G3UZV2 921 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm8897L7N294 181 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pex5O09012 639 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Cdk16Q04735 496 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Lmntd2Q0VET5 664 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Baiap2l2Q80Y61 522 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Cnksr2Q80YA9 1032 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pcdhb7Q8CDY9 829 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tp53bp2Q8CG79 1128 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Spire2Q8K1S6 718 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Lrrc42Q8R2U7 421 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pcdhgb4Q91XX6 912 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 CygbQ9CX80 190 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Serpinb9bQ9DAV6 377 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gja10Q9WUS4 505 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Lbhd1A0A087WPA0 259 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Galnt4O08832 578 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 OmdO35103 423 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ppef2O35385 757 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Cyp2d11P24457 504 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Adcy6Q01341 1165 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Mars2Q499X9 586 aaKnown RBP10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ccdc32Q8BS39 179 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Btbd9Q8C726 612 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ndc80Q9D0F1 642 aaKnown RBP10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Krt16Q9Z2K1 469 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Rrn3B2RS91 656 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Axin1O35625 863 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Chordc1Q9D1P4 331 aaKnown RBP10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ltb4r2Q9JJL9 360 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tuba8Q9JJZ2 449 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm10134F6ZQC6 126 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 S100a6P14069 89 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Apoa1Q00623 264 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ksr1Q61097 873 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Armcx6Q8K3A6 301 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Olfr805Q8VFI4 319 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Traf7Q922B6 594 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pdk3Q922H2 415 aaKnown RBP10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Oas1fQ14AZ4 364 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Prl2c1Q5SVL9 228 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Lrrc24Q8BHA1 521 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Mcpt4P21812 246 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Prox1P48437 737 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Mark2Q05512 776 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Papd5Q68ED3 633 aaKnown RBP10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tex13c3Q810P0 219 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ms4a5Q810P8 197 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Cox16Q9CR63 106 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Fam187aQ9D3R5 417 aa10.59□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Skint6A7XUZ6 1240 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rb1P13405 921 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tsta3P23591 321 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Arid5aQ3U108 590 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Bcap31Q61335 245 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ntrk3Q6VNS1 825 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Usp1Q8BJQ2 784 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rmnd5bQ91YQ7 393 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Pdxdc1Q99K01 787 aaKnown RBP10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Vwa5b1A9Z1V5 1215 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ifi207E9Q3L4 978 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Pde4aO89084 844 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Klra1P20937 262 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Atp9bP98195 1146 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 RetsatQ64FW2 609 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gramd1aQ8VEF1 722 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Mrfap1Q9CQL7 125 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Borcs5Q9D920 195 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Wdr12Q9JJA4 423 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Slfn1Q9Z0I7 337 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sall1Q9ER74 1322 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Efna5O08543 228 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Mxi1P50540 228 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Wbp4Q61048 376 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 WlsQ6DID7 541 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Q6GQU0 248 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Trim62Q80V85 475 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Pcmtd2Q8BHD8 359 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Chchd6Q91VN4 273 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tmco1Q921L3 188 aaKnown RBP10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cnbd2Q9D5U8 673 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Thap11Q9JJD0 305 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Akt3Q9WUA6 479 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Trpm1Q2TV84 1622 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Adcy1O88444 1118 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Slc12a1P55014 1095 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Pkn1P70268 946 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Clhc1Q5M6W3 596 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sema4bQ62179 823 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Znf579Q80VM4 562 aa10.58□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms